Literature DB >> 33563981

L1 retrotransposons exploit RNA m6A modification as an evolutionary driving force.

Sung-Yeon Hwang1,2, Hyunchul Jung3, Seyoung Mun4,5,6, Sungwon Lee1,2, Kiwon Park1,2, S Chan Baek1,2, Hyungseok C Moon7, Hyewon Kim1,2, Baekgyu Kim1,2, Yongkuk Choi1,2, Young-Hyun Go8, Wanxiangfu Tang9, Jongsu Choi10, Jung Kyoon Choi3, Hyuk-Jin Cha8, Hye Yoon Park7, Ping Liang9, V Narry Kim1,2, Kyudong Han11,12,13, Kwangseog Ahn14,15.   

Abstract

L1 retrotransposons can pose a threat to genome integrity. The host has evolved to restrict L1 replication. However, mechanisms underlying L1 propagation out of the host surveillance remains unclear. Here, we propose an evolutionary survival strategy of L1, which exploits RNA m6A modification. We discover that m6A 'writer' METTL3 facilitates L1 retrotransposition, whereas m6A 'eraser' ALKBH5 suppresses it. The essential m6A cluster that is located on L1 5' UTR serves as a docking site for eukaryotic initiation factor 3 (eIF3), enhances translational efficiency and promotes the formation of L1 ribonucleoprotein. Furthermore, through the comparative analysis of human- and primate-specific L1 lineages, we find that the most functional m6A motif-containing L1s have been positively selected and became a distinctive feature of evolutionarily young L1s. Thus, our findings demonstrate that L1 retrotransposons hijack the RNA m6A modification system for their successful replication.

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Year:  2021        PMID: 33563981      PMCID: PMC7873242          DOI: 10.1038/s41467-021-21197-1

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  65 in total

1.  Initial sequencing and analysis of the human genome.

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Journal:  Nature       Date:  2001-02-15       Impact factor: 49.962

2.  DNA repair mediated by endonuclease-independent LINE-1 retrotransposition.

Authors:  Tammy A Morrish; Nicolas Gilbert; Jeremy S Myers; Bethaney J Vincent; Thomas D Stamato; Guillermo E Taccioli; Mark A Batzer; John V Moran
Journal:  Nat Genet       Date:  2002-05-13       Impact factor: 38.330

3.  Identification, characterization, and cell specificity of a human LINE-1 promoter.

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Journal:  Mol Cell Biol       Date:  1990-12       Impact factor: 4.272

4.  Unconventional translation of mammalian LINE-1 retrotransposons.

Authors:  Reid S Alisch; Jose L Garcia-Perez; Alysson R Muotri; Fred H Gage; John V Moran
Journal:  Genes Dev       Date:  2006-01-15       Impact factor: 11.361

5.  Many human L1 elements are capable of retrotransposition.

Authors:  D M Sassaman; B A Dombroski; J V Moran; M L Kimberland; T P Naas; R J DeBerardinis; A Gabriel; G D Swergold; H H Kazazian
Journal:  Nat Genet       Date:  1997-05       Impact factor: 38.330

6.  Characterization of LINE-1 ribonucleoprotein particles.

Authors:  Aurélien J Doucet; Amy E Hulme; Elodie Sahinovic; Deanna A Kulpa; John B Moldovan; Huira C Kopera; Jyoti N Athanikar; Manel Hasnaoui; Alain Bucheton; John V Moran; Nicolas Gilbert
Journal:  PLoS Genet       Date:  2010-10-07       Impact factor: 5.917

7.  Cell type-specific expression of LINE-1 open reading frames 1 and 2 in fetal and adult human tissues.

Authors:  Süleyman Ergün; Christian Buschmann; Jochen Heukeshoven; Kristin Dammann; Frank Schnieders; Heidrun Lauke; Fariba Chalajour; Nerbil Kilic; Wolf H Strätling; Gerald G Schumann
Journal:  J Biol Chem       Date:  2004-03-31       Impact factor: 5.157

8.  A potential role for the nucleolus in L1 retrotransposition.

Authors:  John L Goodier; Eric M Ostertag; Kurt A Engleka; Maria C Seleme; Haig H Kazazian
Journal:  Hum Mol Genet       Date:  2004-03-17       Impact factor: 6.150

9.  L1 retrotransposition requires rapid ORF1p oligomerization, a novel coiled coil-dependent property conserved despite extensive remodeling.

Authors:  M Nabuan Naufer; Kathryn E Callahan; Pamela R Cook; Cesar E Perez-Gonzalez; Mark C Williams; Anthony V Furano
Journal:  Nucleic Acids Res       Date:  2015-12-15       Impact factor: 16.971

10.  Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome capture.

Authors:  Joel I Perez-Perri; Birgit Rogell; Thomas Schwarzl; Frank Stein; Yang Zhou; Mandy Rettel; Annika Brosig; Matthias W Hentze
Journal:  Nat Commun       Date:  2018-10-23       Impact factor: 14.919

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  6 in total

Review 1.  Melatonin: Regulation of Viral Phase Separation and Epitranscriptomics in Post-Acute Sequelae of COVID-19.

Authors:  Doris Loh; Russel J Reiter
Journal:  Int J Mol Sci       Date:  2022-07-23       Impact factor: 6.208

2.  Subfamily-specific differential contribution of individual monomers and the tether sequence to mouse L1 promoter activity.

Authors:  Lingqi Kong; Karabi Saha; Yuchi Hu; Jada N Tschetter; Chase E Habben; Leanne S Whitmore; Changfeng Yao; Xijin Ge; Ping Ye; Simon J Newkirk; Wenfeng An
Journal:  Mob DNA       Date:  2022-04-20

Review 3.  Role of Transposable Elements in Genome Stability: Implications for Health and Disease.

Authors:  Audesh Bhat; Trupti Ghatage; Sonali Bhan; Ganesh P Lahane; Arti Dhar; Rakesh Kumar; Raj K Pandita; Krishna M Bhat; Kenneth S Ramos; Tej K Pandita
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4.  RNA m6A modification orchestrates a LINE-1-host interaction that facilitates retrotransposition and contributes to long gene vulnerability.

Authors:  Feng Xiong; Ruoyu Wang; Joo-Hyung Lee; Shenglan Li; Shin-Fu Chen; Zian Liao; Lana Al Hasani; Phuoc T Nguyen; Xiaoyu Zhu; Joanna Krakowiak; Dung-Fang Lee; Leng Han; Kuang-Lei Tsai; Ying Liu; Wenbo Li
Journal:  Cell Res       Date:  2021-06-09       Impact factor: 46.297

Review 5.  Crosstalk between N6-methyladenosine modification and circular RNAs: current understanding and future directions.

Authors:  Xin Wang; Rui Ma; Xilin Zhang; Lian Cui; Yangfeng Ding; Weimin Shi; Chunyuan Guo; Yuling Shi
Journal:  Mol Cancer       Date:  2021-09-24       Impact factor: 27.401

Review 6.  RNA m6A meets transposable elements and chromatin.

Authors:  Chenxi He; Fei Lan
Journal:  Protein Cell       Date:  2021-07-13       Impact factor: 14.870

  6 in total

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