Robby Büchner1, Mattis Fondell2, Eric J Mascarenhas1,2, Annette Pietzsch2, Vinícius Vaz da Cruz2, Alexander Föhlisch1,2. 1. Institute of Physics and Astronomy, University of Potsdam, Karl-Liebknecht-Str. 24-25, 14476 Potsdam, Germany. 2. Institute for Methods and Instrumentation for Synchrotron Radiation Research, Helmholtz-Zentrum Berlin für Materialien und Energie, Albert-Einstein-Str. 15, 12489 Berlin, Germany.
Abstract
Steric hindrance of hydration and hydrogen bond enhancement by localized charges have been identified as key factors for the massive chemical differences between the hydroxypyridine/pyridone isomers in aqueous solution. While all isomers occur mainly in the hydroxypyridine form in the gas phase, they differ by more than 3 orders of magnitude both in their acidity and tautomeric equilibrium constants upon hydration. By monitoring the electronic and solvation structures as a function of the protonation state and the O- substitution position on the pyridine ring, the amplification of the isomeric differences in aqueous solution has been investigated. Near-edge X-ray absorption fine structure (NEXAFS) measurements at the N K-edge served as the probe of the chemical state. The combination of molecular dynamics simulations, complete active space self-consistent field (CASSCF), and time-dependent density functional theory (TD-DFT) spectral calculations contributes to unraveling the principles of tautomerism and acidity in multiple biochemical systems based on tautomerism.
Steric hindrance of hydration and hydrogen bond enhancement by localized charges have been identified as key factors for the massive chemical differences between the hydroxypyridine/pyridone isomers in aqueous solution. While all isomers occur mainly in the hydroxypyridine form in the gas phase, they differ by more than 3 orders of magnitude both in their acidity and tautomeric equilibrium constants upon hydration. By monitoring the electronic and solvation structures as a function of the protonation state and the O- substitution position on the pyridine ring, the amplification of the isomeric differences in aqueous solution has been investigated. Near-edge X-ray absorption fine structure (NEXAFS) measurements at the N K-edge served as the probe of the chemical state. The combination of molecular dynamics simulations, complete active space self-consistent field (CASSCF), and time-dependent density functional theory (TD-DFT) spectral calculations contributes to unraveling the principles of tautomerism and acidity in multiple biochemical systems based on tautomerism.
The proton transfer
connecting the enolic hydroxypyridines (HPs)
and ketonicpyridones (POs) is prototypical for tautomerism in biological
systems.[1,2] As seen in Figure , both HP and PO occur in three isomeric
structures of varying distances between the nitrogen and oxygen functional
sites, ranging from ortho (2HP/2PO) to meta (3HP/3PO) to para (4HP/4PO).
Due to these geometric differences, the oxygen substituent is conjugated
with the pyridine ring in the keto forms of the ortho and para isomers
(2PO and 4PO), whereas the meta isomer has no conjugate carbon–oxygen
path neither in the 3HP nor the 3PO form.
Figure 1
Equilibrium structures
in aqueous solution of the hydroxypyridine/pyridone
(HP/PO) tautomers for the ortho, meta, and para isomers and their
fully deprotonated states. They vary in oxygen conjugation, tautomeric
equilibrium (KT = [PO]/[HP][3,4]), and acidity (pKa[5,6]).
Resonance structures are given in the Supporting Information.
Equilibrium structures
in aqueous solution of the hydroxypyridine/pyridone
(HP/PO) tautomers for the ortho, meta, and para isomers and their
fully deprotonated states. They vary in oxygenconjugation, tautomeric
equilibrium (KT = [PO]/[HP][3,4]), and acidity (pKa[5,6]).
Resonance structures are given in the Supporting Information.Independent of these
structural variations, the enol form (HP)
is favored over the keto tautomer (PO) in the gas phase by all isomers.[1] Upon aqueous solvation, massive differences between
the equilibration of the ortho and para versus the meta isomers occur
with regard to their tautomeric equilibrium, acidity, and photoreactive
properties, with significant implications to their functionalities.In aqueous solution at room temperature, the ortho and para isomers
shift equilibrium away from the gas phase 2HP and 4HP forms to the
2PO and 4PO forms, whereas the meta isomer equilibrates as an equal
mixture of the 3HP and 3PO tautomers[3,4] (see Figure ). These local configurations
in aqueous solution are accompanied by a similar acidity of the ortho
(mainly 2PO) and para (mainly 4PO) isomers in contrast to the mixed
(3HP/3PO) meta isomer. In addition, the meta isomer in aqueous solution
contains with its 3HP form an efficient UV chromophore, whereas the
ortho 2PO and para 4PO isomers do not act as such.Since 3HP/3POconstitutes inter alia the core moiety of vitamin
B6,[7,8] i.e., increased photosensitivity
is caused upon vitamin B6 overdosing in humans, related
to the enolic3HP tautomer in aqueous solution.[9]The ortho tautomer is directly related to multiple
nucleobases
of DNA and RNA,[10] where tautomerism and
acidity can lead to mutations and diseases, i.e., by altering the
hydrogen bond patterns in DNA.[11,12] Nevertheless, biological
processes such as the removal of damaged nucleobases[2] or the versatile catalysis by RNA enzymes[13] depend on the acidity and tautomerism of nucleobases. Understanding
the principles of the HP/PO protonation states sheds light on the
evolution of nucleobases as storage for genetic information in all
living organisms[13] and helps to design
active substances for new medical treatments (e.g., viral lethal mutagenesis[14]).In this work, it is established, as
a function of the protonation
state and the position of the O– substituent on
the pyridine ring, how charge differences and the steric hindrance
of hydrogen bond coordination to the first aqueous solvation shell
drive, on a microscopic level, the amplification of the initially
small molecular differences of the three HP/PO isomers, causing, macroscopically,
3 orders of magnitude variation in tautomericconstants and acidity
among the ortho, meta, and para isomers in aqueous solution. The findings
are based on the element-specific orbital state populations, chemical
sensitivity of near-edge X-ray absorption fine structure (NEXAFS)
combined with molecular dynamics (MD) simulations connected to the
ab initio X-ray spectrum calculations at the level of complete active
space self-consistent field (CASSCF) and time-dependent density functional
theory (TD-DFT). In this effort, the ortho, meta, and para pyridone
isomers; their fully deprotonated forms, respectively; and the protonated
and deprotonatedpyridine precursor are investigated in aqueous solution.
Methods
Experimental
Details
All samples were purchased from
Sigma-Aldrich with a minimum purity of 95% and dissolved in deionized
water to obtain 0.1 M solutions. The protonation (of pyridine) and
deprotonation (of pyridones) were established by a 1.2-fold molar
excess of HCl and KOH, respectively.The nmTransmission NEXAFS
endstation facilitates the spectroscopic investigation of dissolved
organiccompounds in the soft X-ray regime.[15] The sample enters the experimental chamber through two nozzles leading
to liquid jets, which form a leaf-shaped surface upon collision. The
thickness of the liquid sheet can be varied in the region of the penetration
depth of soft X-rays so that transmission measurements become feasible.
At the same time, radiation-induced sample damage is prevented through
continuous sample replenishment. For the present investigation, a
flow rate of 2.5–3.0 mL/min was used in combination with 46
μm sized nozzles.Photons were provided by Bessy II (Helmholtz-Zentrum
Berlin) beamlines
UE49-SGM[16] for prestudies and UE52-SGM[17] for the quantitative absorption measurements.
Bandwidths of 0.16 eV (in the case of 2PO) and 0.11 eV (otherwise)
were used. The presented spectra were recorded in 0.05 eV steps with
an average acquisition time of 6s per point.The extinction
coefficient (ϵ) was obtained from transmittance
(T) and concentration (c) according
to Beer–Lambert’s law.The sample thickness (l)
was estimated using tabulated values[18] of
the water transmittance at 396 eV yielding 9.2 ± 0.9 μm
for 2PO and 5.6 ± 0.6 μm for the other samples.Since
the first region of the spectrum is predominantly independent
of the dissolved sample, it is not only used for the calculation of
the thickness but also to remove the background of the water transmittance
by a linear fit.For the energy calibration of the experimental
results, the signature
of co-dissolved N2 at 400.84 eV[19,20] was used. A fit of these features in the spectrum of the pristine
solvent was subtracted from the spectra of deprotonated samples to
yield the pure NEXAFS of the investigated substances.
Computational
Details
All electronic structure calculations
were carried out with the Orca package.[21] All geometries were optimized at the RI-MP2 level with the aug-cc-pVTZ
using the aug-cc-pVTZ/C auxiliary basis. The RI-JK approximation was
used with the aug-cc-pVTZ/JK fitting basis set.The MD simulations
were performed with the Gromacs package. The OPLS-aa force field has
been used for parameterization except for the charges for the intermolecular
Coulomb interactions, which were derived by the chelpg[22] procedure (based on the relaxed RI-MP2 density).
The water molecules were described by the SPC/Fw[23] model. Additional details regarding the MD simulations
are available in the Supporting Information.From the MD simulations, minimally solvated models were constructed,
including only the hydrogen bonding interactions with the N:, N–H,
O–H, and C=O functional groups. These minimally solvated models
were used for the subsequent spectral calculations at the CASSCF and
TD-DFT levels of theory.To model the behavior of the lowest
π* resonance across the
systematic series, CASSCF calculations were carried out in the gas
phase, as well as explicitly solvated. The aug-cc-pCVTZ basis set
was used for all atoms except for the nitrogen, which was described
by the larger aug-cc-pCVQZ. In the solvated cases, the explicit water
molecules were described by the smaller cc-pCVDZ basis. The bulk-liquid
effects were modeled by the conductor-like polarizable continuum model[24] (CPCM). The CASSCF calculations used RI-MP2
natural orbitals as a starting point. The π orbitals of the
conjugated ring were included in active space, namely, six active
electrons in six orbitals, henceforth called CAS(6,6). This setup
excludes only the oxygen lone pair orbital, which is usually poorly
correlated in CASSCF calculations. Using this active space, a state-averaged
(SA) calculation was carried out for the ground state and the lowest
valence-excited state. The valence CASSCF solution was then used as
a starting point for the core-state calculation. The N(1s) orbital
was rotated into the active space leading to CAS(8,7); then, an SA-CASSCF
calculation was carried out including only the ground state and the
lowest core-excited state. This setup is expected to recover the majority
of static and dynamiccorrelations for the π* transitions.For Figure , the
CASSCF transition moments were shifted by −0.75 eV and convoluted
with a Voigt profile of 0.13 eV lifetime broadening[25] and 0.51 eV (deprotonatednitrogen) or 0.80 eV (protonated
nitrogen) experimental broadening to match the experimental results.
Figure 4
(a) Linear trend of the protonation shift (Δhνπ*) and
the pyridone acidity (pKa[6,7]). (b) Comparison of the experimental NEXAFS with the CASSCF spectra
for the gas phase and with explicit solvation (details are given in
the Methods section) demonstrating that the
magnitude of this shift is governed by solvent–solute interactions.
TD-DFT calculations were performed to study the remaining resonances
of the X-ray absorption spectra. The PBE0[26] hybrid functional was used in all calculations. Additional details
are available in the Supporting Information.
Results and Discussion
General Protonation Shift
Near-edge
X-ray absorption
fine structure (NEXAFS) at the nitrogen K-edge allows us to distinguish
and quantify the protonation state at the nitrogen atom. Both the
directly coordinated hydrogen atom and the hydrogen bond toward coordinated
water molecules in the first solvation shell are monitored in this
approach.In Figure b,e, the N K-edge NEXAFS of the ortho, meta, and para isomers
are presented, as well as their fully deprotonated states in direct
comparison to the (pyridine/Py) precursor and its conjugated acid
(pyridinium/PyH+). A characteristic blue shift of the lowest
unoccupied molecular orbital (LUMO) π* state is observed for
all molecules upon protonation (depicted in Figure b,e) via the one-electron transition (≥72%)
of the N(1s) electron elevated to the lowest unoccupied π* orbital.
Figure 2
N K-edge
NEXAFS spectra of the pyridine precursor (b) and the ortho,
meta, para pyridone isomers from top to bottom (e). A protonation
shift of the N(1s) → π* resonance is observed across
the series. The energies of these transitions are influenced by the
competition for charges between nitrogen and oxygen in the core-excited
state, as illustrated by the π* orbital plots of the fully deprotonated
(a, d) and protonated species (c, f).
N K-edge
NEXAFS spectra of the pyridine precursor (b) and the ortho,
meta, para pyridone isomers from top to bottom (e). A protonation
shift of the N(1s) → π* resonance is observed across
the series. The energies of these transitions are influenced by the
competition for charges between nitrogen and oxygen in the core-excited
state, as illustrated by the π* orbital plots of the fully deprotonated
(a, d) and protonated species (c, f).The photon energy range of 402–406 eV monitors excitations
into higher unoccupied molecular orbitals, mostly of σ* character.
In the region of 403.4–403.8 eV, a shoulder (≈0.01 M–1 μm–1) is observed, which
is only present in the protonated state. This feature originates from
a transition that is mostly localized at the N–H bond. Consequently,
it is missing in the spectra of deprotonated species.The N K-edge spectra of the pyridones (see Figure e) largely resemble
the NEXAFS of Py(H+). Only the meta isomer exhibits a second
π* resonance closely below the feature of 3PO– due to the presence of the HP tautomer. No indication of the presence
of 2HP and 4HP has been found, in agreement with the tautomeric equilibrium
constants (see Figure ).The shape resonances above 406 eV differ both between the
pyridone
isomers and in comparison with Py(H+). These quasi-bound
transitions are known to provide information on interatomic distances.[27] The shape resonances are most pronounced in
the spectra of PyH+ and 4PO, where the nitrogen atom has
an equal distance to both neighboring carbon atoms. The position of
this feature is in qualitative agreement with the calculated C–N
bond distances: 408.2 eV for 4PO (1.351 Å) and 409.3 eV for pyridinium
(1.342 Å). For 3HP/3PO with 1.341–1.346 Å C–N
bond distances, the resonance position is intermediate (409.1 eV)
and in 2PO the distances differ so widely (1.356, 1.369 Å) that
the shape resonance position cannot be assigned unambiguously.The shape resonance of the deprotonated species seems to be red-shifted
similar to the other features. This effect is not caused by the minor
changes of the C–N bond distance upon deprotonation but by
a general adjustment of the electronic and solvation structures, as
discussed in the following sections.
Isomer Specific Charge
Distribution
Even though all
pyridones show a protonation shift similar to that of Py(H+), the exact peak positions differ depending on the position of the
O– substituent. This becomes particularly clear
from a comparison of the π* resonances, which also have been
used to investigate tautomerism in the past.[28]Besides the peak position, the width of the π* resonance
depends on the protonation state (of the nitrogen atom in the respective
molecule). The broadening (full width at half-maximum (FWHM) + 0.29
eV) for pyridinium/pyridones results mainly from Franck–Condon
vibrational excitations[29] of the N–H
bond during the X-ray absorption process, which are absent in the
deprotonated species.The interspecies shift of the π*
resonance, first, depends
on the initial electron density at the (nitrogen) atom, which is excited
during the X-ray absorption process.[30] The
better the core charge is screened, the lower is the ionization energy
of N(1s) electrons. As far as resonant absorption features are considered,
the core electron is excited into a bound state. Since the transition
energy depends, inter alia, on the energy of the initial orbital of
this electron, excitation and ionization energies are linked by Koopmans’
theorem. Therefore, the NEXAFS peak position contains information
on the chemical state of nitrogen in the samples.2PO– has the highest charge density at the nitrogen
site and the smallest ionization potential, followed by 4PO– where the charge is more distributed over the whole molecule. In
3PO–, the electron density is shifted to the oxygen,
and in Py, the charge at the nitrogen site is even lower, since the
molecule is formally neutral. The same argumentation holds for the
protonated case, even though the screening capacity is lower for all
species (see Figure ).Second, the relaxation of the final state due to the Coulomb
attraction
between the excited electron and the core-hole influences the excitation
energy, especially of the lowest NEXAFS feature. As known from benzene,[31] the higher the contribution of the atomic orbital
at the excited atom to the relaxed molecular orbital, the more the
red shift of π* resonances. In other words, the π* resonance
is lowered, if the lowest unoccupied molecular orbital (LUMO) is centered
at the nitrogen atom after its relaxation.The relaxed π*
orbitals are depicted in Figure a,c,d,f for the fully deprotonated
and protonated Py(H+) and pyridones. It can be seen that
in the PyH+case, the probability of the excited electrons
to be close to the carbon atoms in the meta position
is nearly zero. Oppositely, in 4PO, the LUMO is distributed over all
carbon atoms and has a strong contribution from the oxygen. Consequently,
the excitation energy (hνπ*) of PyH+ is expected to be strongly red-shifted, whereas
only slight deviations are expected for 4PO. The shift of 3PO and
2PO, due to the described final state effect, is intermediate. If
single molecules are compared between their protonation states, it
is observed that the deprotonated entity has a LUMO, which is more
localized at the nitrogen site. Consequently, the blue shift upon
protonation is increased by final state effects.Taking these
relaxation effects into account, it can be understood
that the initially expected state order hνπ*(2PO–) < hνπ*(4PO–) < hνπ*(3PO–) < hνπ*(Py) is disturbed by the creation of the core-hole
leading to hνπ*(2PO–)< hνπ*(PyH) < hνπ*(3PO–) < hνπ*(4PO–). In the protonated case, the excitation
energy of PyH+ is lowered to beneath that of hνπ*(2PO)
due to final state effects. This order of resonance energies is observed
both experimentally and in the calculations (see Table ).
Table 1
Experimental
and Calculated (CASSCF)
N K-Edge π* Resonance Positions in eV
deprotonated
protonated
molecule
calcd gas
calcd
aq.
exptl
calcd gas
calcd aq.
exptl
Py(H+)
399.68
399.78
399.03
401.78
401.21
400.52
2PO(−)
399.34
399.87
399.00
402.10
401.54
400.72
3PO(−)
400.04
399.91
399.14
402.14
401.41
400.72
4PO(−)
400.25
400.09
399.37
403.15
401.67
401.07
By causing the characteristic π* shifts, the core-hole effect
provides detailed information on the isomeric differences in charge
distribution. In Py(H+), nitrogen is the most electronegative
element and the excited electron, therefore, remains in close proximity.
In the pyridones, nitrogencompetes for electron density with oxygen.
This effect increases from 3PO(−) to 2PO(−) to 4PO(−). In 3PO(−), the oxygen
is not part of the conjugated system and is already in a charged state.
In 2PO(−), both the oxygen and nitrogen atoms are
part of the aromatic structure but pull charge in similar directions.
In contrast, the conjugated oxygen in 4PO(−) withdraws
charge from the nitrogen site, as they lie in opposite sites of the
ring.In short, the constitutional differences between the pyridone
isomers
cause considerable differences in the electronic structure and charge
distribution. These variations are already present in the gas phase,
as the CASSCF calculations show (see Table ). Nevertheless, without an aqueous environment,
the electronic differences are not mirrored by macroscopic properties,
i.e., the tautomeric equilibrium constants. To gain an insight into
the microscopic amplification of the isomeric differences by solvent–solute
effects, the solvation structure is analyzed in the following section.
Hydrogen Bonding Interactions
Figure shows how the heteroatoms govern the solvent–solute
interactions of Py and the pyridone isomers. In Py, the nitrogen atom
accepts on average 0.9 hydrogen bonds (HBs) from water, whereby the
bonds are mostly localized out of plane.[32,33] If the nitrogen atom is protonated, it naturally cannot accept HBs
and, instead, the NH group donates approximately 0.7 HB to the solvent.
Figure 3
Competition
of hydrogen bond coordination to the first aqueous
solvation shell between the nitrogen and oxygen heteroatom as a function
of distance between these functional sites. Solvent O and H densities
are depicted for isovalues of 0.68 and 0.09, respectively. The additional
heteroatom of the pyridones (compared to pyridine) enhances the total
coordination number, even though the hydration of the nitrogen site
is sterically hindered if the heteroatoms are in close proximity.
The nonconjugate O– substituent in 3PO(−) leads to additional coordination.
Competition
of hydrogen bond coordination to the first aqueous
solvation shell between the nitrogen and oxygen heteroatom as a function
of distance between these functional sites. Solvent O and H densities
are depicted for isovalues of 0.68 and 0.09, respectively. The additional
heteroatom of the pyridones (compared to pyridine) enhances the total
coordination number, even though the hydration of the nitrogen site
is sterically hindered if the heteroatoms are in close proximity.
The nonconjugate O– substituent in 3PO(−) leads to additional coordination.The second heteroatom in PO/HP leads to an increase of solvent
density in the first solvation shell compared to Py(H+).
The solvent structure around the oxygen has the same donutlike shape
for all pyridones, and the solvent arrangement at the nitrogen site
is similar to that of Py(H+). The coordination numbersa and hydrogen bonding properties, however, differ
drastically between the isomers and their protonation states. The
comparison of protonated and deprotonated species demonstrates that
higher charges always lead to stronger hydrogen bonding interactions.Within the deprotonatedpyridones, the averaged number of accepted
hydrogen bonds at the nitrogen site increases with the distance to
the oxygen atom, thus from 2PO– (1.6 HB) to 3PO– (1.9 HB) to 4PO– (2.1 HB). The N···H
distance is almost constant at 1.8 Å. These observations reveal
that the hydration is sterically hindered in the case of close proximity
of the two heteroatoms. This finding is in agreement with the enhanced
hydration of the oxygen site in 4PO– compared to
that in 2PO–. The coordination number at the oxygen
site reaches its maximum for 3PO– due to the concentration
of charge at the O– substituent, which is not conjugated
to the aromatic ring in this isomer. The localized charge enhances
hydrogen bond acceptance (3.1 HB) compared to the para (2.9 HB) and the sterically disadvantaged ortho isomers (2.8 HB).Steric hindrance between the two hydrogen bonding sites and the
lack of oxygenconjugation in 3PO are the dominating factors for the
hydration of the protonated pyridones as well. 3PO exhibits the highest
coordination number both at the oxygen and nitrogen sites, followed
by 4PO and 2PO. While hydrogen bond donation by the protonated nitrogen
site is similar for all isomers (0.6 HB, 1.9 Å; see the Supporting Information), the number of hydrogen
bonds that are accepted by the oxygen atom increase from 2PO (1.6)
to 4PO (1.7) to 3PO (2.0) with a common distance of 1.7 Å.Due to the positive charge of PyH+, HBs are more likely
(0.7 HB) and contracted (1.8 Å) at the nitrogen site of this
molecule. Analogously, HB acceptance by the deprotonatednitrogen
atom is reduced in 3HP and Py (0.9 HB, 1.9 Å) compared to that
in the anions.For 3HP, the probability of accepting HBs at
the oxygen is reduced
to 0.7 due to the bound proton. The hydrogen atom, however, donates
approximately 1.5 HBs to water (1.8 Å). The reason for the additionally
donated hydrogen bond compared to the N–H case is the more
polar O–H bond, as a result of the higher electronegativity
of oxygen. The combination of HB donation and acceptance leads to
a coordination number at the oxygen site similar to that at 3PO.The intensity of the solvent–solute interaction as a function
of the O– substitution position can be summarized
as follows: the steric hindrance of the solvation increases from the
para to the meta to the ortho isomer. 3PO(−) forms
additional hydrogen bonds as a result of the nonconjugate C–O– bond. Thereby, the solvation structure underlines
the special significance of 3PO, whose acidity and tautomeric equilibrium
differ largely from those of the other isomers.
Solvent Influence
on Acidity and Tautomerism
Based
on the observations of HB formation and the arrangement of water molecules
around the pyridones and Py(H+), information on the interactions
of hydration and the electronic structure can be gained from the NEXAFS.
As seen in the CASSCF calculations (see Figure b), the π*
resonance position can shift by up to 1.48 eV in the presence of a
protic solvent like water.(a) Linear trend of the protonation shift (Δhνπ*) and
the pyridone acidity (pKa[6,7]). (b) Comparison of the experimental NEXAFS with the CASSCF spectra
for the gas phase and with explicit solvation (details are given in
the Methods section) demonstrating that the
magnitude of this shift is governed by solvent–solute interactions.As it is known from the sulfur derivative of 2PO
(2-thiopyridone),[34] the core-excitation
distorts the solvent–solute
interactions, which explains the solvation shifts. According to the
equivalent core principle, the effect of a core-hole can be approximated
by an increase of the nuclear charge by 1; e.g., core-excited nitrogen
(N*) largely behaves like oxygen. Consequently, the polarity of the
N*–H bond is increased compared to that of N–H, which
strengthens the HB in N–H···OH2.
Therefore, the excitation energy is lowered for the protonated species.
The magnitude of the red shift is the smallest for 2PO and the largest
for 4PO. These differences are mainly caused by the steric hindrance
of hydration if NHδ+ and Oδ− are close together, as observed in the MD simulation of the ground
state.The solvation shifts of the deprotonated species are
comparatively
small, because the solvent–solute interactions are already
strong in the ground state. The additional charge in the excited state
destabilizes the hydrogen bonding structure, especially in 2PO–, where the LUMO has large contributions at the close-lying
Nδ− and Oδ− sites.Taken together, the response of the solvent–solute interaction
to the core-excitation leads to a reduction of the protonation shift
Δhνπ* for all species. This shift correlates (within the
errors of the measurement) entirely with the acidity of the keto tautomersb. The experimentally observed trend is well reproduced
by the CASSCF calculations with explicit solvation. Thereby, the computational
findings support the abovementioned reasoning that the smaller Δhνπ* is, the stronger the solvent–solute interactions are. Based
on the general relation of hydrogen bonding and acidity,[35] it can be stated that the stronger the stabilization
of the pyridones by the solvent, the weaker the N–H bond.It is known from the MD simulations that 3PO has the largest coordination
number of all keto forms and that this species also shows a −0.73
eV calculated π* shift upon solvation (see Figure ). From this, it becomes apparent
why 3PO(−) has the lowest Δhνπ* gap
of all pyridones. The strong stabilization of 3PO by the solvent is
in agreement with the general assumption that the more polar (keto)
tautomer is energetically preferable in aqueous solutions.[36] However, this effect is not only mediated by
the macroscopic dielectricity of water, as initially assumed in multiple
studies,[7,8,37] but also by
hydrogen bonding interactions. Since these interactions diminish for
higher temperatures, it can be expected that the equilibrium shifts
to the enol form upon heating as observed for 3HP/3PO.[38]For 2HP/2PO and 4HP/4PO, the higher polarity
of the keto form explains
why the tautomeric equilibrium is inverted between the gas phase and
aqueous solution. In contrast, 3PO does not seem to obey this rule,
as it is the most polar form, but coexists with its enol tautomer
in water. In fact, due to missing resonance stabilization of the charges
in 3PO, it is severely disadvantaged to the point of not being energetically
preferable in an aqueous solution even though it is highly stabilized.
This interpretation is in agreement with the rule of Zilberg and Dick
that the less stable tautomer receives higher stabilization by the
aqueous environment.[39] Additionally, the
instability of the zwitterionic3PO explains the higher acidity of
3HP/3POcompared to the other pyridones.The acidity difference
between 2PO and 4POcan be understood, now,
as a result of the higher interaction of 4PO with water. The additional
stabilization of 4PO agrees with the inverted order of equilibrium
constants between vapor and aqueous solution .[36] Analogous
to the 3POcase, the more intense 4POwater interactions stabilize
this tautomer but cause its protonation state to be more dependent
on the solvent. In other words, the abovementioned finding applies:
the higher the stabilization by the solvent, the weaker the N–H
bond. Since the solvation, in turn, is dependent on the steric hindrance
of the hydration and its enhancement by localized charges, it can
be stated that these factors control the acidity and tautomerism of
pyridones at the same time.
Conclusions
The
amplification of isomeric differences of HP/PO by aqueous hydrogen
bonding has been investigated using N K-edge NEXAFS spectroscopy accompanied
by systematicCASSCF calculations, distinguishing inherent molecular
properties and solvation effects: the dominance of the enol form for
all HP/PO isomers in the gas phase is mirrored by minor differences
in the electronic structure, especially of the ortho and para isomers
in the ground state. The core-excited state reveals first differences
dependent on the O– substitution position and conjugation
to the pyridine ring. In aqueous solution, the keto tautomers of 2HP/2PO
and 4HP/4PO have been spectroscopically identified as dominating entities,
whereas 3POcoexists with the enol form. This is consistent with previous
studies in the ultraviolet range of light.The HP/PO solvation
structure has been investigated in detail by
MD simulations. The common theme among all molecules considered in
this study is their ability to form strong hydrogen bonds with the
solvent, both by donating a hydrogen bond to water or by accepting
it, and thus stabilizing the molecule. However, in 2PO, a steric hindrance
of the hydration reduces the solvent stabilization. In contrast, 3PO
receives the highest stabilization due to its zwitterioniccharacter.The strong interaction between the electronic structure of the
pyridones and the surrounding water molecules shows that the increase
of solvent stabilization of the keto tautomer from 2PO to 4PO to 3PO,
being expressed by the N(1s) → π* protonation shift,
directly correlates with an increase in acidity. It also explains
that the tautomeric equilibrium is not only inverted but that the
HP form exists as a miniscule fraction for 2HP/2PO and 4HP/4PO upon
solvation. 3PO, which does not contain a neutral resonance structure,
is energetically so unfavorable that solvent stabilization, even though
it is comparatively high, only increases the share of 3PO in aqueous
solution to 50%.The water environment amplifies the tautomeric
differences of the
pyridone isomers because the intensity of the HB interaction depends
both on the localization of charges as a result of the oxygenconjugation
and the proximity of the heteroatoms leading to sterical hindrance.
Hydrogen bonding not only stabilizes the keto tautomers but also weakens
the covalent bond of the proton at the nitrogen site by the same ratio.These findings clarify the principles of the HP/PO tautomerism
and acidity, which have been under investigation for more than 100
years now,[40] and they help to unravel the
biological function of nucleobases, vitamin B6, and the pathways of
the natural remediation of pyridine.[41]
Authors: Vinícius Vaz da Cruz; Nina Ignatova; Rafael C Couto; Daniil A Fedotov; Dirk R Rehn; Viktoriia Savchenko; Patrick Norman; Hans Ågren; Sergey Polyutov; Johannes Niskanen; Sebastian Eckert; Raphael M Jay; Mattis Fondell; Thorsten Schmitt; Annette Pietzsch; Alexander Föhlisch; Faris Gel'mukhanov; Michael Odelius; Victor Kimberg Journal: J Chem Phys Date: 2019-06-21 Impact factor: 3.488
Authors: Deyu Li; Bogdan I Fedeles; Vipender Singh; Chunte Sam Peng; Katherine J Silvestre; Allison K Simi; Jeffrey H Simpson; Andrei Tokmakoff; John M Essigmann Journal: Proc Natl Acad Sci U S A Date: 2014-07-28 Impact factor: 11.205
Authors: Mattis Fondell; Sebastian Eckert; Raphael M Jay; Christian Weniger; Wilson Quevedo; Johannes Niskanen; Brian Kennedy; Florian Sorgenfrei; Daniel Schick; Erika Giangrisostomi; Ruslan Ovsyannikov; Katrin Adamczyk; Nils Huse; Philippe Wernet; Rolf Mitzner; Alexander Föhlisch Journal: Struct Dyn Date: 2017-08-14 Impact factor: 2.920