Literature DB >> 33562565

SUMO and Transcriptional Regulation: The Lessons of Large-Scale Proteomic, Modifomic and Genomic Studies.

Mathias Boulanger1,2, Mehuli Chakraborty1,2, Denis Tempé1,2, Marc Piechaczyk1,2, Guillaume Bossis1,2.   

Abstract

One major role of the eukaryotic peptidic post-translational modifier SUMO in the cell is transcriptional control. This occurs via modification of virtually all classes of transcriptional actors, which include transcription factors, transcriptional coregulators, diverse chromatin components, as well as Pol I-, Pol II- and Pol III transcriptional machineries and their regulators. For many years, the role of SUMOylation has essentially been studied on individual proteins, or small groups of proteins, principally dealing with Pol II-mediated transcription. This provided only a fragmentary view of how SUMOylation controls transcription. The recent advent of large-scale proteomic, modifomic and genomic studies has however considerably refined our perception of the part played by SUMO in gene expression control. We review here these developments and the new concepts they are at the origin of, together with the limitations of our knowledge. How they illuminate the SUMO-dependent transcriptional mechanisms that have been characterized thus far and how they impact our view of SUMO-dependent chromatin organization are also considered.

Entities:  

Keywords:  SUMO; chromatin; chromatin modification; heterochromatin; transcription; transcription factors; transcriptional coregulators

Mesh:

Substances:

Year:  2021        PMID: 33562565      PMCID: PMC7915335          DOI: 10.3390/molecules26040828

Source DB:  PubMed          Journal:  Molecules        ISSN: 1420-3049            Impact factor:   4.411


  296 in total

Review 1.  Coordinating cell cycle-regulated histone gene expression through assembly and function of the Histone Locus Body.

Authors:  Robert J Duronio; William F Marzluff
Journal:  RNA Biol       Date:  2017-01-06       Impact factor: 4.652

2.  Chemically Sumoylated Histone H4 Stimulates Intranucleosomal Demethylation by the LSD1-CoREST Complex.

Authors:  Abhinav Dhall; Caroline E Weller; Aurea Chu; Patrick M M Shelton; Champak Chatterjee
Journal:  ACS Chem Biol       Date:  2017-08-30       Impact factor: 5.100

3.  Polycomb protein Cbx4 promotes SUMO modification of de novo DNA methyltransferase Dnmt3a.

Authors:  Bing Li; Jing Zhou; Peng Liu; Jialei Hu; Hong Jin; Yohei Shimono; Masahide Takahashi; Guoliang Xu
Journal:  Biochem J       Date:  2007-07-15       Impact factor: 3.857

Review 4.  Histone Lysine and Genomic Targets of Histone Acetyltransferases in Mammals.

Authors:  Anne K Voss; Tim Thomas
Journal:  Bioessays       Date:  2018-08-24       Impact factor: 4.345

5.  SUMOylation Regulates Growth Factor Independence 1 in Transcriptional Control and Hematopoiesis.

Authors:  Daniel Andrade; Matthew Velinder; Jason Singer; Luke Maese; Diana Bareyan; Hong Nguyen; Mahesh B Chandrasekharan; Helena Lucente; David McClellan; David Jones; Sunil Sharma; Fang Liu; Michael E Engel
Journal:  Mol Cell Biol       Date:  2016-05-02       Impact factor: 4.272

6.  SUMO modification of the DEAD box protein p68 modulates its transcriptional activity and promotes its interaction with HDAC1.

Authors:  A-M F Jacobs; S M Nicol; R G Hislop; E G Jaffray; R T Hay; F V Fuller-Pace
Journal:  Oncogene       Date:  2007-03-19       Impact factor: 9.867

7.  A SUMO-acetyl switch in PXR biology.

Authors:  Wenqi Cui; Mengxi Sun; Shupei Zhang; Xunan Shen; Nadezhda Galeva; Todd D Williams; Jeff L Staudinger
Journal:  Biochim Biophys Acta       Date:  2016-02-12

8.  Sumoylation of Rap1 mediates the recruitment of TFIID to promote transcription of ribosomal protein genes.

Authors:  Pierre Chymkowitch; Aurélie P Nguéa; Håvard Aanes; Christian J Koehler; Bernd Thiede; Susanne Lorenz; Leonardo A Meza-Zepeda; Arne Klungland; Jorrit M Enserink
Journal:  Genome Res       Date:  2015-03-23       Impact factor: 9.043

Review 9.  Writing, erasing and reading histone lysine methylations.

Authors:  Kwangbeom Hyun; Jongcheol Jeon; Kihyun Park; Jaehoon Kim
Journal:  Exp Mol Med       Date:  2017-04-28       Impact factor: 8.718

10.  Comprehensive list of SUMO targets in Caenorhabditis elegans and its implication for evolutionary conservation of SUMO signaling.

Authors:  Krzysztof Drabikowski; Jacqueline Ferralli; Michal Kistowski; Jacek Oledzki; Michal Dadlez; Ruth Chiquet-Ehrismann
Journal:  Sci Rep       Date:  2018-01-18       Impact factor: 4.379

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  11 in total

1.  Smc5/6 silences episomal transcription by a three-step function.

Authors:  Fabien Abdul; Aurélie Diman; Bastien Baechler; Dhivya Ramakrishnan; Dmytro Kornyeyev; Rudolf K Beran; Simon P Fletcher; Michel Strubin
Journal:  Nat Struct Mol Biol       Date:  2022-09-12       Impact factor: 18.361

2.  Waves of sumoylation support transcription dynamics during adipocyte differentiation.

Authors:  Xu Zhao; Ivo A Hendriks; Stéphanie Le Gras; Tao Ye; Lucía Ramos-Alonso; Aurélie Nguéa P; Guro Flor Lien; Fatemeh Ghasemi; Arne Klungland; Bernard Jost; Jorrit M Enserink; Michael L Nielsen; Pierre Chymkowitch
Journal:  Nucleic Acids Res       Date:  2022-02-22       Impact factor: 16.971

Review 3.  Regulation of Viral Restriction by Post-Translational Modifications.

Authors:  Célia Chamontin; Guillaume Bossis; Sébastien Nisole; Nathalie J Arhel; Ghizlane Maarifi
Journal:  Viruses       Date:  2021-11-01       Impact factor: 5.048

4.  Phytosulfokine α (PSKα) delays senescence and reinforces SUMO1/SUMO E3 ligase SIZ1 signaling pathway in cut rose flowers (Rosa hybrida cv. Angelina).

Authors:  Morteza Soleimani Aghdam; Amin Ebrahimi; Morteza Sheikh-Assadi
Journal:  Sci Rep       Date:  2021-12-01       Impact factor: 4.379

5.  SUMOylation of the Kv4.2 Ternary Complex Increases Surface Expression and Current Amplitude by Reducing Internalization in HEK 293 Cells.

Authors:  Meghyn A Welch; Leslie-Anne R Jansen; Deborah J Baro
Journal:  Front Mol Neurosci       Date:  2021-11-02       Impact factor: 6.261

6.  SUMOylation of Jun fine-tunes the Drosophila gut immune response.

Authors:  Amarendranath Soory; Girish S Ratnaparkhi
Journal:  PLoS Pathog       Date:  2022-03-07       Impact factor: 6.823

7.  SENP3-mediated TIP60 deSUMOylation is required for DNA-PKcs activity and DNA damage repair.

Authors:  Yang Han; Xin Huang; Xiaoyu Cao; Yuchen Li; Lei Gao; Jin Jia; Gang Li; Hejiang Guo; Xiaochang Liu; Hongling Zhao; Hua Guan; Pingkun Zhou; Shanshan Gao
Journal:  MedComm (2020)       Date:  2022-03-22

8.  Leishmania amazonensis sabotages host cell SUMOylation for intracellular survival.

Authors:  Kendi Okuda; Miriam Maria Silva Costa Franco; Ari Yasunaga; Ricardo Gazzinelli; Michel Rabinovitch; Sara Cherry; Neal Silverman
Journal:  iScience       Date:  2022-08-13

Review 9.  Lessons to Learn for Adequate Targeted Therapy Development in Metastatic Colorectal Cancer Patients.

Authors:  Helena Oliveres; David Pesántez; Joan Maurel
Journal:  Int J Mol Sci       Date:  2021-05-09       Impact factor: 5.923

10.  Dynamic sumoylation of promoter-bound general transcription factors facilitates transcription by RNA polymerase II.

Authors:  Mohammad S Baig; Yimo Dou; Benjamin G Bergey; Russell Bahar; Justin M Burgener; Marjan Moallem; James B McNeil; Akhi Akhter; Giovanni L Burke; Veroni S Sri Theivakadadcham; Patricia Richard; Damien D'Amours; Emanuel Rosonina
Journal:  PLoS Genet       Date:  2021-09-29       Impact factor: 5.917

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