Literature DB >> 33562230

Selected Thoughts on Hydrophobicity in Drug Design.

Lillian L Lou1, John C Martin1.   

Abstract

The fundamental aim of drug design in research and development is to invent molecules with selective affinity towards desired disease-associated targets. At the atomic loci of binding surfaces, systematic structural variations can define affinities between drug candidates and biomolecules, and thereby guide the optimization of safety, efficacy and pharmacologic properties. Hydrophobic interaction between biomolecules and drugs is integral to binding affinity and specificity. Examples of antiviral drug discovery are discussed.

Entities:  

Keywords:  acyclic nucleoside phosphonates; drug design; hydrophobic interaction; nucleotide antivirals

Mesh:

Substances:

Year:  2021        PMID: 33562230      PMCID: PMC7914489          DOI: 10.3390/molecules26040875

Source DB:  PubMed          Journal:  Molecules        ISSN: 1420-3049            Impact factor:   4.411


  24 in total

Review 1.  Profound methyl effects in drug discovery and a call for new C-H methylation reactions.

Authors:  Heike Schönherr; Tim Cernak
Journal:  Angew Chem Int Ed Engl       Date:  2013-10-22       Impact factor: 15.336

2.  Improvement of bone mineral density and markers of proximal renal tubular function in chronic hepatitis B patients switched from tenofovir disoproxil fumarate to tenofovir alafenamide.

Authors:  Tse-Ling Fong; Brian T Lee; Andy Tien; Mimi Chang; Carolina Lim; Aiden Ahn; Ho S Bae
Journal:  J Viral Hepat       Date:  2019-01-16       Impact factor: 3.728

3.  A novel selective broad-spectrum anti-DNA virus agent.

Authors:  E De Clercq; A Holý; I Rosenberg; T Sakuma; J Balzarini; P C Maudgal
Journal:  Nature       Date:  1986 Oct 2-8       Impact factor: 49.962

4.  Twenty-eight day safety, antiviral activity, and pharmacokinetics of tenofovir alafenamide for treatment of chronic hepatitis B infection.

Authors:  Kosh Agarwal; Scott K Fung; Tuan T Nguyen; Wendy Cheng; Eric Sicard; Stephen D Ryder; John F Flaherty; Eileen Lawson; Sally Zhao; G Mani Subramanian; John G McHutchison; Edward J Gane; Graham R Foster
Journal:  J Hepatol       Date:  2014-10-30       Impact factor: 25.083

5.  Synthesis and antiherpes virus activity of phosphate and phosphonate derivatives of 9-[(1,3-dihydroxy-2-propoxy)methyl]guanine.

Authors:  E J Prisbe; J C Martin; D P McGee; M F Barker; D F Smee; A E Duke; T R Matthews; J P Verheyden
Journal:  J Med Chem       Date:  1986-05       Impact factor: 7.446

6.  Selective intracellular activation of a novel prodrug of the human immunodeficiency virus reverse transcriptase inhibitor tenofovir leads to preferential distribution and accumulation in lymphatic tissue.

Authors:  William A Lee; Gong-Xin He; Eugene Eisenberg; Tomas Cihlar; Swami Swaminathan; Andrew Mulato; Kenneth C Cundy
Journal:  Antimicrob Agents Chemother       Date:  2005-05       Impact factor: 5.191

7.  Antisense gene inhibition by oligonucleotides containing C-5 propyne pyrimidines.

Authors:  R W Wagner; M D Matteucci; J G Lewis; A J Gutierrez; C Moulds; B C Froehler
Journal:  Science       Date:  1993-06-04       Impact factor: 47.728

8.  Influenza neuraminidase inhibitors possessing a novel hydrophobic interaction in the enzyme active site: design, synthesis, and structural analysis of carbocyclic sialic acid analogues with potent anti-influenza activity.

Authors:  C U Kim; W Lew; M A Williams; H Liu; L Zhang; S Swaminathan; N Bischofberger; M S Chen; D B Mendel; C Y Tai; W G Laver; R C Stevens
Journal:  J Am Chem Soc       Date:  1997-01-29       Impact factor: 15.419

9.  9-[(1,3-Dihydroxy-2-propoxy)methyl]guanine: a new potent and selective antiherpes agent.

Authors:  J C Martin; C A Dvorak; D F Smee; T R Matthews; J P Verheyden
Journal:  J Med Chem       Date:  1983-05       Impact factor: 7.446

10.  Anti-herpesvirus activity of the acyclic nucleoside 9-(1,3-dihydroxy-2-propoxymethyl)guanine.

Authors:  D F Smee; J C Martin; J P Verheyden; T R Matthews
Journal:  Antimicrob Agents Chemother       Date:  1983-05       Impact factor: 5.191

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  2 in total

1.  Prediction of DNA-Binding Protein-Drug-Binding Sites Using Residue Interaction Networks and Sequence Feature.

Authors:  Wei Wang; Yu Zhang; Dong Liu; HongJun Zhang; XianFang Wang; Yun Zhou
Journal:  Front Bioeng Biotechnol       Date:  2022-04-20

Review 2.  Tribute to John C. Martin at the Twentieth Anniversary of the Breakthrough of Tenofovir in the Treatment of HIV Infections.

Authors:  Erik De Clercq
Journal:  Viruses       Date:  2021-12-02       Impact factor: 5.048

  2 in total

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