Literature DB >> 33561545

Deep Learning for the Diagnosis of Stage in Retinopathy of Prematurity: Accuracy and Generalizability across Populations and Cameras.

Jimmy S Chen1, Aaron S Coyner2, Susan Ostmo1, Kemal Sonmez3, Sanyam Bajimaya4, Eli Pradhan4, Nita Valikodath5, Emily D Cole5, Tala Al-Khaled5, R V Paul Chan5, Praveer Singh6, Jayashree Kalpathy-Cramer6, Michael F Chiang7, J Peter Campbell8.   

Abstract

PURPOSE: Stage is an important feature to identify in retinal images of infants at risk of retinopathy of prematurity (ROP). The purpose of this study was to implement a convolutional neural network (CNN) for binary detection of stages 1, 2, and 3 in ROP and to evaluate its generalizability across different populations and camera systems.
DESIGN: Diagnostic validation study of CNN for stage detection. PARTICIPANTS: Retinal fundus images obtained from preterm infants during routine ROP screenings.
METHODS: Two datasets were used: 5943 fundus images obtained by RetCam camera (Natus Medical, Pleasanton, CA) from 9 North American institutions and 5049 images obtained by 3nethra camera (Forus Health Incorporated, Bengaluru, India) from 4 hospitals in Nepal. Images were labeled based on the presence of stage by 1 to 3 expert graders. Three CNN models were trained using 5-fold cross-validation on datasets from North America alone, Nepal alone, and a combined dataset and were evaluated on 2 held-out test sets consisting of 708 and 247 images from the Nepali and North American datasets, respectively. MAIN OUTCOME MEASURES: Convolutional neural network performance was evaluated using area under the receiver operating characteristic curve (AUROC), area under the precision-recall curve (AUPRC), sensitivity, and specificity.
RESULTS: Both the North American- and Nepali-trained models demonstrated high performance on a test set from the same population: AUROC, 0.99; AUPRC, 0.98; sensitivity, 94%; and AUROC, 0.97; AUPRC, 0.91; and sensitivity, 73%; respectively. However, the performance of each model decreased to AUROC of 0.96 and AUPRC of 0.88 (sensitivity, 52%) and AUROC of 0.62 and AUPRC of 0.36 (sensitivity, 44%) when evaluated on a test set from the other population. Compared with the models trained on individual datasets, the model trained on a combined dataset achieved improved performance on each respective test set: sensitivity improved from 94% to 98% on the North American test set and from 73% to 82% on the Nepali test set.
CONCLUSIONS: A CNN can identify accurately the presence of ROP stage in retinal images, but performance depends on the similarity between training and testing populations. We demonstrated that internal and external performance can be improved by increasing the heterogeneity of the training dataset features of the training dataset, in this case by combining images from different populations and cameras.
Copyright © 2020 American Academy of Ophthalmology. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Artificial intelligence; Generalizability; Neural networks; Retinopathy of prematurity; Stage

Mesh:

Year:  2021        PMID: 33561545      PMCID: PMC8364291          DOI: 10.1016/j.oret.2020.12.013

Source DB:  PubMed          Journal:  Ophthalmol Retina        ISSN: 2468-6530


  39 in total

1.  Incidence and risk factors of retinopathy of prematurity and utility of the national screening criteria in a tertiary center in Iran.

Authors:  Milad Khorshidifar; Homayoun Nikkhah; Alireza Ramezani; Morteza Entezari; Narsis Daftarian; Hamid Norouzi; Mansoor Shahiari; Mitra Radfar; Ramin Norinia; Saeed Karimi
Journal:  Int J Ophthalmol       Date:  2019-08-18       Impact factor: 1.779

2.  Development and Validation of a Deep Learning System to Detect Glaucomatous Optic Neuropathy Using Fundus Photographs.

Authors:  Hanruo Liu; Liu Li; I Michael Wormstone; Chunyan Qiao; Chun Zhang; Ping Liu; Shuning Li; Huaizhou Wang; Dapeng Mou; Ruiqi Pang; Diya Yang; Linda M Zangwill; Sasan Moghimi; Huiyuan Hou; Christopher Bowd; Lai Jiang; Yihan Chen; Man Hu; Yongli Xu; Hong Kang; Xin Ji; Robert Chang; Clement Tham; Carol Cheung; Daniel Shu Wei Ting; Tien Yin Wong; Zulin Wang; Robert N Weinreb; Mai Xu; Ningli Wang
Journal:  JAMA Ophthalmol       Date:  2019-12-01       Impact factor: 7.389

3.  Smartphone-based fundus photography for screening of plus-disease retinopathy of prematurity.

Authors:  Tapan P Patel; Michael T Aaberg; Yannis M Paulus; Philip Lieu; Vaidehi S Dedania; Cynthia X Qian; Cagri G Besirli; Todd Margolis; Daniel A Fletcher; Tyson N Kim
Journal:  Graefes Arch Clin Exp Ophthalmol       Date:  2019-09-09       Impact factor: 3.117

4.  Use of Deep Learning for Detailed Severity Characterization and Estimation of 5-Year Risk Among Patients With Age-Related Macular Degeneration.

Authors:  Philippe M Burlina; Neil Joshi; Katia D Pacheco; David E Freund; Jun Kong; Neil M Bressler
Journal:  JAMA Ophthalmol       Date:  2018-12-01       Impact factor: 7.389

5.  Deep-Learning Convolutional Neural Networks Accurately Classify Genetic Mutations in Gliomas.

Authors:  P Chang; J Grinband; B D Weinberg; M Bardis; M Khy; G Cadena; M-Y Su; S Cha; C G Filippi; D Bota; P Baldi; L M Poisson; R Jain; D Chow
Journal:  AJNR Am J Neuroradiol       Date:  2018-05-10       Impact factor: 3.825

6.  Glioma Grading on Conventional MR Images: A Deep Learning Study With Transfer Learning.

Authors:  Yang Yang; Lin-Feng Yan; Xin Zhang; Yu Han; Hai-Yan Nan; Yu-Chuan Hu; Bo Hu; Song-Lin Yan; Jin Zhang; Dong-Liang Cheng; Xiang-Wei Ge; Guang-Bin Cui; Di Zhao; Wen Wang
Journal:  Front Neurosci       Date:  2018-11-15       Impact factor: 4.677

7.  Pivotal trial of an autonomous AI-based diagnostic system for detection of diabetic retinopathy in primary care offices.

Authors:  Michael D Abràmoff; Philip T Lavin; Michele Birch; Nilay Shah; James C Folk
Journal:  NPJ Digit Med       Date:  2018-08-28

8.  Deep Learning Algorithm for Automated Diagnosis of Retinopathy of Prematurity Plus Disease.

Authors:  Zachary Tan; Samantha Simkin; Connie Lai; Shuan Dai
Journal:  Transl Vis Sci Technol       Date:  2019-12-02       Impact factor: 3.283

9.  Clinically applicable deep learning for diagnosis and referral in retinal disease.

Authors:  Jeffrey De Fauw; Joseph R Ledsam; Bernardino Romera-Paredes; Stanislav Nikolov; Nenad Tomasev; Sam Blackwell; Harry Askham; Xavier Glorot; Brendan O'Donoghue; Daniel Visentin; George van den Driessche; Balaji Lakshminarayanan; Clemens Meyer; Faith Mackinder; Simon Bouton; Kareem Ayoub; Reena Chopra; Dominic King; Alan Karthikesalingam; Cían O Hughes; Rosalind Raine; Julian Hughes; Dawn A Sim; Catherine Egan; Adnan Tufail; Hugh Montgomery; Demis Hassabis; Geraint Rees; Trevor Back; Peng T Khaw; Mustafa Suleyman; Julien Cornebise; Pearse A Keane; Olaf Ronneberger
Journal:  Nat Med       Date:  2018-08-13       Impact factor: 53.440

Review 10.  Preterm-associated visual impairment and estimates of retinopathy of prematurity at regional and global levels for 2010.

Authors:  Hannah Blencowe; Joy E Lawn; Thomas Vazquez; Alistair Fielder; Clare Gilbert
Journal:  Pediatr Res       Date:  2013-12       Impact factor: 3.756

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  6 in total

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Journal:  Transl Vis Sci Technol       Date:  2021-12-01       Impact factor: 3.283

2.  The development of "automated visual evaluation" for cervical cancer screening: The promise and challenges in adapting deep-learning for clinical testing: Interdisciplinary principles of automated visual evaluation in cervical screening.

Authors:  Kanan T Desai; Brian Befano; Zhiyun Xue; Helen Kelly; Nicole G Campos; Didem Egemen; Julia C Gage; Ana-Cecilia Rodriguez; Vikrant Sahasrabuddhe; David Levitz; Paul Pearlman; Jose Jeronimo; Sameer Antani; Mark Schiffman; Silvia de Sanjosé
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Review 3.  Applications of natural language processing in ophthalmology: present and future.

Authors:  Jimmy S Chen; Sally L Baxter
Journal:  Front Med (Lausanne)       Date:  2022-08-08

4.  Deepfakes in Ophthalmology: Applications and Realism of Synthetic Retinal Images from Generative Adversarial Networks.

Authors:  Jimmy S Chen; Aaron S Coyner; R V Paul Chan; M Elizabeth Hartnett; Darius M Moshfeghi; Leah A Owen; Jayashree Kalpathy-Cramer; Michael F Chiang; J Peter Campbell
Journal:  Ophthalmol Sci       Date:  2021-11-16

5.  Synthetic Medical Images for Robust, Privacy-Preserving Training of Artificial Intelligence: Application to Retinopathy of Prematurity Diagnosis.

Authors:  Aaron S Coyner; Jimmy S Chen; Ken Chang; Praveer Singh; Susan Ostmo; R V Paul Chan; Michael F Chiang; Jayashree Kalpathy-Cramer; J Peter Campbell
Journal:  Ophthalmol Sci       Date:  2022-02-11

6.  Artificial intelligence in ophthalmology - Machines think!

Authors:  Santosh G Honavar
Journal:  Indian J Ophthalmol       Date:  2022-04       Impact factor: 2.969

  6 in total

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