Literature DB >> 33558556

Winner-takes-all resource competition redirects cascading cell fate transitions.

Rong Zhang1, Hanah Goetz1, Juan Melendez-Alvarez1, Jiao Li1,2, Tian Ding2, Xiao Wang1, Xiao-Jun Tian3.   

Abstract

Failure of modularity remains a significant challenge for assembling synthetic gene circuits with tested modules as they often do not function as expected. Competition over shared limited gene expression resources is a crucial underlying reason. It was reported that resource competition makes two seemingly separate genes connect in a graded linear manner. Here we unveil nonlinear resource competition within synthetic gene circuits. We first build a synthetic cascading bistable switches (Syn-CBS) circuit in a single strain with two coupled self-activation modules to achieve two successive cell fate transitions. Interestingly, we find that the in vivo transition path was redirected as the activation of one switch always prevails against the other, contrary to the theoretically expected coactivation. This qualitatively different type of resource competition between the two modules follows a 'winner-takes-all' rule, where the winner is determined by the relative connection strength between the modules. To decouple the resource competition, we construct a two-strain circuit, which achieves successive activation and stable coactivation of the two switches. These results illustrate that a highly nonlinear hidden interaction between the circuit modules due to resource competition may cause counterintuitive consequences on circuit functions, which can be controlled with a division of labor strategy.

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Year:  2021        PMID: 33558556      PMCID: PMC7870843          DOI: 10.1038/s41467-021-21125-3

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  55 in total

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Review 4.  Engineered microbial consortia: strategies and applications.

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  8 in total

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