Literature DB >> 33557274

Genomic and Epigenomic Profile of Uterine Smooth Muscle Tumors of Uncertain Malignant Potential (STUMPs) Revealed Similarities and Differences with Leiomyomas and Leiomyosarcomas.

Donatella Conconi1, Serena Redaelli1, Andrea Alberto Lissoni1,2, Chiara Cilibrasi3, Patrizia Perego4, Eugenio Gautiero5, Elena Sala5, Mariachiara Paderno1,2, Leda Dalprà1, Fabio Landoni1,2, Marialuisa Lavitrano1, Gaia Roversi1,5, Angela Bentivegna1.   

Abstract

Uterine smooth muscle tumors of uncertain malignant potential (STUMPs) represent a heterogeneous group of tumors that cannot be histologically diagnosed as unequivocally benign or malignant. For this reason, many authors are working to obtain a better definition of diagnostic and prognostic criteria. In this work, we analyzed the genomic and epigenomic profile of uterine smooth muscle tumors (USMTs) in order to find similarities and differences between STUMPs, leiomyosarcomas (LMSs) and leiomyomas (LMs), and possibly identify prognostic factors in this group of tumors. Array-CGH data on 23 USMTs demonstrated the presence of a more similar genomic profile between STUMPs and LMSs. Some genes, such as PRKDC and PUM2, with a potential prognostic value, were never previously associated with STUMP. The methylation data appears to be very promising, especially with regards to the divergent profile found in the sample that relapsed, characterized by an overall CGI hypomethylation. Finally, the Gene Ontology analysis highlighted some cancer genes that could play a pivotal role in the unexpected aggressive behavior that can be found in some of these tumors. These genes could prove to be prognostic markers in the future.

Entities:  

Keywords:  Genome Wide DNA Methylation; array-CGH; copy number alterations; uterine STUMP

Mesh:

Substances:

Year:  2021        PMID: 33557274      PMCID: PMC7914585          DOI: 10.3390/ijms22041580

Source DB:  PubMed          Journal:  Int J Mol Sci        ISSN: 1422-0067            Impact factor:   5.923


  38 in total

1.  Developmental programming of CpG island methylation profiles in the human genome.

Authors:  Ravid Straussman; Deborah Nejman; Douglas Roberts; Israel Steinfeld; Barak Blum; Nissim Benvenisty; Itamar Simon; Zohar Yakhini; Howard Cedar
Journal:  Nat Struct Mol Biol       Date:  2009-04-19       Impact factor: 15.369

2.  Predictors of adverse outcome in uterine smooth muscle tumours of uncertain malignant potential (STUMP): a clinicopathological analysis of 22 cases with a proposal for the inclusion of additional histological parameters.

Authors:  Mamta Gupta; Anna L Laury; Marisa R Nucci; Bradley J Quade
Journal:  Histopathology       Date:  2018-05-21       Impact factor: 5.087

3.  Long non-coding RNA PCAT7 regulates ELF2 signaling through inhibition of miR-134-5p in nasopharyngeal carcinoma.

Authors:  Yejun Liu; Zezhang Tao; Jining Qu; Xuhong Zhou; Chenghong Zhang
Journal:  Biochem Biophys Res Commun       Date:  2017-07-17       Impact factor: 3.575

Review 4.  Causes and consequences of DNA hypomethylation in human cancer.

Authors:  Michèle J Hoffmann; Wolfgang A Schulz
Journal:  Biochem Cell Biol       Date:  2005-06       Impact factor: 3.626

5.  RNA binding protein PUM2 promotes the stemness of breast cancer cells via competitively binding to neuropilin-1 (NRP-1) mRNA with miR-376a.

Authors:  Lansheng Zhang; Yanwei Chen; Caihong Li; Jinyang Liu; Huiwen Ren; Lishan Li; Xia Zheng; Hui Wang; Zhengxiang Han
Journal:  Biomed Pharmacother       Date:  2019-03-23       Impact factor: 6.529

6.  Hypomethylation of the XIST gene promoter in prostate cancer.

Authors:  Thilo Laner; Wolfgang A Schulz; Rainer Engers; Mirko Müller; Andrea R Florl
Journal:  Oncol Res       Date:  2005       Impact factor: 5.574

7.  Problematic uterine smooth muscle neoplasms. A clinicopathologic study of 213 cases.

Authors:  S W Bell; R L Kempson; M R Hendrickson
Journal:  Am J Surg Pathol       Date:  1994-06       Impact factor: 6.394

8.  Identification of PRKDC (Protein Kinase, DNA-Activated, Catalytic Polypeptide) as an essential gene for colorectal cancer (CRCs) cells.

Authors:  Shangfeng Sun; Shuguang Cheng; Yunxiao Zhu; Peng Zhang; Ning Liu; Tong Xu; Chao Sun; Yanfeng Lv
Journal:  Gene       Date:  2016-03-15       Impact factor: 3.688

9.  High expression of PRKDC promotes breast cancer cell growth via p38 MAPK signaling and is associated with poor survival.

Authors:  Yan Zhang; Wei-Kang Yang; Guo-Ming Wen; Hongping Tang; Chuan-An Wu; Yan-Xia Wu; Zhi-Liang Jing; Min-Shan Tang; Guang-Long Liu; Da-Zhou Li; Yan-Hua Li; Yong-Jian Deng
Journal:  Mol Genet Genomic Med       Date:  2019-09-12       Impact factor: 2.183

10.  DNA-PK-A candidate driver of hepatocarcinogenesis and tissue biomarker that predicts response to treatment and survival.

Authors:  Liam Cornell; Joanne M Munck; Clara Alsinet; Augusto Villanueva; Laura Ogle; Catherine E Willoughby; Despina Televantou; Huw D Thomas; Jennifer Jackson; Alastair D Burt; David Newell; John Rose; Derek M Manas; Geoffrey I Shapiro; Nicola J Curtin; Helen L Reeves
Journal:  Clin Cancer Res       Date:  2014-12-05       Impact factor: 12.531

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  3 in total

1.  Clinical and Histopathological Predictors of Recurrence in Uterine Smooth Muscle Tumor of Uncertain Malignant Potential (STUMP): A Multicenter Retrospective Cohort Study of Tertiary Centers.

Authors:  Fulvio Borella; Stefano Cosma; Domenico Ferraioli; Isabelle Ray-Coquard; Nicolas Chopin; Pierre Meeus; Vincent Cockenpot; Giorgio Valabrega; Giulia Scotto; Margherita Turinetto; Nicoletta Biglia; Luca Fuso; Luca Mariani; Dorella Franchi; Ailyn Mariela Vidal Urbinati; Ida Pino; Gianluca Bertschy; Mario Preti; Chiara Benedetto; Isabella Castellano; Paola Cassoni; Luca Bertero
Journal:  Ann Surg Oncol       Date:  2022-08-17       Impact factor: 4.339

Review 2.  Epigenomic and enhancer dysregulation in uterine leiomyomas.

Authors:  Oliwia W Mlodawska; Priyanka Saini; J Brandon Parker; Jian-Jun Wei; Serdar E Bulun; Melissa A Simon; Debabrata Chakravarti
Journal:  Hum Reprod Update       Date:  2022-06-30       Impact factor: 17.179

3.  The Functional Role and Regulatory Mechanism of Bromodomain-Containing Protein 9 in Human Uterine Leiomyosarcoma.

Authors:  Qiwei Yang; Maria Victoria Bariani; Ali Falahati; Azad Khosh; Ricardo R Lastra; Hiba Siblini; Thomas G Boyer; Ayman Al-Hendy
Journal:  Cells       Date:  2022-07-10       Impact factor: 7.666

  3 in total

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