Literature DB >> 33555975

TAEL 2.0: An Improved Optogenetic Expression System for Zebrafish.

Jesselynn LaBelle1, Adela Ramos-Martinez1, Kyle Shen1, Laura B Motta-Mena2, Kevin H Gardner3, Stefan C Materna1, Stephanie Woo1.   

Abstract

Inducible gene expression systems are valuable tools for studying biological processes. We previously developed an optogenetic gene expression system called TAEL that is optimized for use in zebrafish. When illuminated with blue light, TAEL transcription factors dimerize and activate gene expression downstream of the TAEL-responsive C120 promoter. By using light as the inducing agent, the TAEL/C120 system overcomes limitations of traditional inducible expression systems by enabling fine spatial and temporal regulation of gene expression. In this study, we describe ongoing efforts to improve the TAEL/C120 system. We made modifications to both the TAEL transcriptional activator and the C120 regulatory element, collectively referred to as TAEL 2.0. We demonstrate that TAEL 2.0 consistently induces higher levels of reporter gene expression and at a faster rate, but with comparable background and toxicity as the original TAEL system. With these improvements, we were able to create functional stable transgenic lines to express the TAEL 2.0 transcription factor either ubiquitously or with a tissue-specific promoter. We demonstrate that the ubiquitous line in particular can be used to induce expression at late embryonic and larval stages, addressing a major deficiency of the original TAEL system. This improved optogenetic expression system will be a broadly useful resource for the zebrafish community.

Entities:  

Keywords:  gene expression; light-activated transcription factor; optogenetics; zebrafish

Mesh:

Year:  2021        PMID: 33555975      PMCID: PMC8020536          DOI: 10.1089/zeb.2020.1951

Source DB:  PubMed          Journal:  Zebrafish        ISSN: 1545-8547            Impact factor:   1.985


  27 in total

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Journal:  Methods Cell Biol       Date:  2011       Impact factor: 1.441

4.  Use of the Gal4-UAS technique for targeted gene expression in the zebrafish.

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Journal:  Mech Dev       Date:  1999-02       Impact factor: 1.882

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Authors:  Takamasa Mizoguchi; Heather Verkade; Joan K Heath; Atsushi Kuroiwa; Yutaka Kikuchi
Journal:  Development       Date:  2008-06-25       Impact factor: 6.868

6.  Xenopus embryos regulate the nuclear localization of XMyoD.

Authors:  R A Rupp; L Snider; H Weintraub
Journal:  Genes Dev       Date:  1994-06-01       Impact factor: 11.361

7.  Expression of achaete-scute homolog 3 in Xenopus embryos converts ectodermal cells to a neural fate.

Authors:  D L Turner; H Weintraub
Journal:  Genes Dev       Date:  1994-06-15       Impact factor: 11.361

8.  Laser-induced gene expression in specific cells of transgenic zebrafish.

Authors:  M C Halloran; M Sato-Maeda; J T Warren; F Su; Z Lele; P H Krone; J Y Kuwada; W Shoji
Journal:  Development       Date:  2000-05       Impact factor: 6.868

9.  An optogenetic gene expression system with rapid activation and deactivation kinetics.

Authors:  Laura B Motta-Mena; Anna Reade; Michael J Mallory; Spencer Glantz; Orion D Weiner; Kristen W Lynch; Kevin H Gardner
Journal:  Nat Chem Biol       Date:  2014-01-12       Impact factor: 15.040

10.  Natural variability of Kozak sequences correlates with function in a zebrafish model.

Authors:  Steven J Grzegorski; Estelle F Chiari; Amy Robbins; Phillip E Kish; Alon Kahana
Journal:  PLoS One       Date:  2014-09-23       Impact factor: 3.240

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  2 in total

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Review 2.  Seeing the Light: The Use of Zebrafish for Optogenetic Studies of the Heart.

Authors:  Jonathan S Baillie; Matthew R Stoyek; T Alexander Quinn
Journal:  Front Physiol       Date:  2021-12-23       Impact factor: 4.566

  2 in total

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