Literature DB >> 33554225

Loss of protein quality control gene UBR1 sensitizes Saccharomyces cerevisiae to the aminoglycoside hygromycin B.

Avery M Runnebohm1,2, Melissa D Evans1,2, Adam E Richardson1, Samantha M Turk1, James B Olesen1, Philip J Smaldino1, Eric M Rubenstein1.   

Abstract

Ubr1 is a conserved ubiquitin ligase involved in the degradation of aberrant proteins in eukaryotic cells. The human enzyme is found mutated in patients with Johanson-Blizzard syndrome. We hypothesized that Ubr1 is necessary for optimal cellular fitness in conditions associated with elevated abundance of aberrant and misfolded proteins. Indeed, we found that loss of Ubr1 in the model eukaryotic microorganism Saccharomyces cerevisiae strongly sensitizes cells to hygromycin B, which reduces translational fidelity by causing ribosome A site distortion. Our results are consistent with a prominent role for Ubr1 in protein quality control. We speculate that disease manifestations in patients with Johanson-Blizzard syndrome are linked, at least in part, to defects in protein quality control caused by loss of Ubr1 function.

Entities:  

Year:  2020        PMID: 33554225      PMCID: PMC7861132          DOI: 10.33043/FF.6.1.76-83

Source DB:  PubMed          Journal:  Fine Focus


  18 in total

1.  A network of ubiquitin ligases is important for the dynamics of misfolded protein aggregates in yeast.

Authors:  Maria A Theodoraki; Nadinath B Nillegoda; Jagdeep Saini; Avrom J Caplan
Journal:  J Biol Chem       Date:  2012-05-16       Impact factor: 5.157

2.  Cytoplasmic protein quality control degradation mediated by parallel actions of the E3 ubiquitin ligases Ubr1 and San1.

Authors:  Jarrod W Heck; Samantha K Cheung; Randolph Y Hampton
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-28       Impact factor: 11.205

3.  Hygromycin B resistance as dominant selectable marker in yeast.

Authors:  K R Kaster; S G Burgett; T D Ingolia
Journal:  Curr Genet       Date:  1984-07       Impact factor: 3.886

Review 4.  The N-end rule pathway and regulation by proteolysis.

Authors:  Alexander Varshavsky
Journal:  Protein Sci       Date:  2011-08       Impact factor: 6.725

5.  SHRED Is a Regulatory Cascade that Reprograms Ubr1 Substrate Specificity for Enhanced Protein Quality Control during Stress.

Authors:  Tamas Szoradi; Katharina Schaeff; Enrique M Garcia-Rivera; Daniel N Itzhak; Rolf M Schmidt; Peter W Bircham; Kevin Leiss; Juan Diaz-Miyar; Vivian K Chen; Dale Muzzey; Georg H H Borner; Sebastian Schuck
Journal:  Mol Cell       Date:  2018-05-31       Impact factor: 17.970

6.  Growth-based determination and biochemical confirmation of genetic requirements for protein degradation in Saccharomyces cerevisiae.

Authors:  Sheldon G Watts; Justin J Crowder; Samuel Z Coffey; Eric M Rubenstein
Journal:  J Vis Exp       Date:  2015-02-16       Impact factor: 1.355

7.  Systematic genetic analysis with ordered arrays of yeast deletion mutants.

Authors:  A H Tong; M Evangelista; A B Parsons; H Xu; G D Bader; N Pagé; M Robinson; S Raghibizadeh; C W Hogue; H Bussey; B Andrews; M Tyers; C Boone
Journal:  Science       Date:  2001-12-14       Impact factor: 47.728

8.  Rkr1/Ltn1 Ubiquitin Ligase-mediated Degradation of Translationally Stalled Endoplasmic Reticulum Proteins.

Authors:  Justin J Crowder; Marco Geigges; Ryan T Gibson; Eric S Fults; Bryce W Buchanan; Nadine Sachs; Andrea Schink; Stefan G Kreft; Eric M Rubenstein
Journal:  J Biol Chem       Date:  2015-06-08       Impact factor: 5.157

9.  Ubiquitin ligases of the N-end rule pathway: assessment of mutations in UBR1 that cause the Johanson-Blizzard syndrome.

Authors:  Cheol-Sang Hwang; Maja Sukalo; Olga Batygin; Marie-Claude Addor; Han Brunner; Antonio Perez Aytes; Julia Mayerle; Hyun Kyu Song; Alexander Varshavsky; Martin Zenker
Journal:  PLoS One       Date:  2011-09-13       Impact factor: 3.240

10.  The yeast ERAD-C ubiquitin ligase Doa10 recognizes an intramembrane degron.

Authors:  Gregor Habeck; Felix A Ebner; Hiroko Shimada-Kreft; Stefan G Kreft
Journal:  J Cell Biol       Date:  2015-04-27       Impact factor: 10.539

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  2 in total

1.  APC/C Cdh1p and Slx5p/Slx8p ubiquitin ligases confer resistance to aminoglycoside hygromycin B in Saccharomyces cerevisiae.

Authors:  Philip J Smaldino; Jason D True; Ashley L Kalinski; Ellen M Doss; Mary E Tragesser-Tiña; Yanru Huang; Eric M Rubenstein
Journal:  MicroPubl Biol       Date:  2022-03-24

2.  Inner Nuclear Membrane Asi Ubiquitin Ligase Catalytic Subunits Asi1p and Asi3p, but not Asi2p, confer resistance to aminoglycoside hygromycin B in Saccharomyces cerevisiae.

Authors:  Kelsey A Woodruff; Kyle A Richards; Melissa D Evans; Abigail R Scott; Brian M Voas; Courtney Broshar Irelan; James B Olesen; Philip J Smaldino; Eric M Rubenstein
Journal:  MicroPubl Biol       Date:  2021-06-01
  2 in total

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