Literature DB >> 33547911

Cofactors are Remnants of Life's Origin and Early Evolution.

Aaron D Goldman1,2, Betul Kacar3,4,5,6.   

Abstract

The RNA World is one of the most widely accepted hypotheses explaining the origin of the genetic system used by all organisms today. It proposes that the tripartite system of DNA, RNA, and proteins was preceded by one consisting solely of RNA, which both stored genetic information and performed the molecular functions encoded by that genetic information. Current research into a potential RNA World revolves around the catalytic properties of RNA-based enzymes, or ribozymes. Well before the discovery of ribozymes, Harold White proposed that evidence for a precursor RNA world could be found within modern proteins in the form of coenzymes, the majority of which contain nucleobases or nucleoside moieties, such as Coenzyme A and S-adenosyl methionine, or are themselves nucleotides, such as ATP and NADH (a dinucleotide). These coenzymes, White suggested, had been the catalytic active sites of ancient ribozymes, which transitioned to their current forms after the surrounding ribozyme scaffolds had been replaced by protein apoenzymes during the evolution of translation. Since its proposal four decades ago, this groundbreaking hypothesis has garnered support from several different research disciplines and motivated similar hypotheses about other classes of cofactors, most notably iron-sulfur cluster cofactors as remnants of the geochemical setting of the origin of life. Evidence from prebiotic geochemistry, ribozyme biochemistry, and evolutionary biology, increasingly supports these hypotheses. Certain coenzymes and cofactors may bridge modern biology with the past and can thus provide insights into the elusive and poorly-recorded period of the origin and early evolution of life.

Entities:  

Keywords:  Ancient life; Coenzymes; Cofactors; Early evolution; Origin of life; RNA world

Year:  2021        PMID: 33547911      PMCID: PMC7982383          DOI: 10.1007/s00239-020-09988-4

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  50 in total

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Review 8.  Riboswitch effectors as protein enzyme cofactors.

Authors:  Jesse C Cochrane; Scott A Strobel
Journal:  RNA       Date:  2008-04-22       Impact factor: 4.942

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Journal:  Nature       Date:  1998-09-17       Impact factor: 49.962

10.  Reconstructing the evolutionary history of nitrogenases: Evidence for ancestral molybdenum-cofactor utilization.

Authors:  Amanda K Garcia; Hanon McShea; Bryan Kolaczkowski; Betül Kaçar
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4.  Kinetic Analysis Suggests Evolution of Ribosome Specificity in Modern Elongation Factor-Tus from "Generalist" Ancestors.

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6.  Protein cost minimization promotes the emergence of coenzyme redundancy.

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7.  Comprehensive phylogenetic analysis of the ribonucleotide reductase family reveals an ancestral clade.

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8.  Rolling circle RNA synthesis catalyzed by RNA.

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