Literature DB >> 33547315

Mobility, exposure, and epidemiological timelines of COVID-19 infections in China outside Hubei province.

Xiao Fan Liu1, Xiao-Ke Xu2, Ye Wu3,4.   

Abstract

The 2019 coronavirus disease (COVID-19) is pseudonymously linked to more than 100 million cases in the world as of January 2021. High-quality data are needed but lacking in the understanding of and fighting against COVID-19. We provide a complete and updating hand-coded line-list dataset containing detailed information of the cases in China and outside the epicenter in Hubei province. The data are extracted from public disclosures by local health authorities, starting from January 19. This dataset contains a very rich set of features for the characterization of COVID-19's epidemiological properties, including individual cases' demographic information, travel history, potential virus exposure scenario, contacts with known infections, and timelines of symptom onset, quarantine, infection confirmation, and hospitalization. These cases can be considered the baseline COVID-19 transmissibility under extreme mitigation measures, and therefore, a reference for comparative scientific investigation and public policymaking.

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Year:  2021        PMID: 33547315      PMCID: PMC7864941          DOI: 10.1038/s41597-021-00844-8

Source DB:  PubMed          Journal:  Sci Data        ISSN: 2052-4463            Impact factor:   6.444


  14 in total

1.  Temporal dynamics in viral shedding and transmissibility of COVID-19.

Authors:  Xi He; Eric H Y Lau; Peng Wu; Xilong Deng; Jian Wang; Xinxin Hao; Yiu Chung Lau; Jessica Y Wong; Yujuan Guan; Xinghua Tan; Xiaoneng Mo; Yanqing Chen; Baolin Liao; Weilie Chen; Fengyu Hu; Qing Zhang; Mingqiu Zhong; Yanrong Wu; Lingzhai Zhao; Fuchun Zhang; Benjamin J Cowling; Fang Li; Gabriel M Leung
Journal:  Nat Med       Date:  2020-04-15       Impact factor: 53.440

2.  Household transmission of 2009 pandemic influenza A (H1N1) virus in the United States.

Authors:  Simon Cauchemez; Christl A Donnelly; Carrie Reed; Azra C Ghani; Christophe Fraser; Charlotte K Kent; Lyn Finelli; Neil M Ferguson
Journal:  N Engl J Med       Date:  2009-12-31       Impact factor: 91.245

3.  Household Transmission of Ebola Virus: Risks and Preventive Factors, Freetown, Sierra Leone, 2015.

Authors:  Mary R Reichler; James Bangura; Dana Bruden; Charles Keimbe; Nadia Duffy; Harold Thomas; Barbara Knust; Ishmail Farmar; Erin Nichols; Amara Jambai; Oliver Morgan; Thomas Hennessy
Journal:  J Infect Dis       Date:  2018-07-24       Impact factor: 5.226

4.  Reconstruction of Transmission Pairs for Novel Coronavirus Disease 2019 (COVID-19) in Mainland China: Estimation of Superspreading Events, Serial Interval, and Hazard of Infection.

Authors:  Xiao-Ke Xu; Xiao Fan Liu; Ye Wu; Sheikh Taslim Ali; Zhanwei Du; Paolo Bosetti; Eric H Y Lau; Benjamin J Cowling; Lin Wang
Journal:  Clin Infect Dis       Date:  2020-12-15       Impact factor: 9.079

5.  Early epidemiological analysis of the coronavirus disease 2019 outbreak based on crowdsourced data: a population-level observational study.

Authors:  Kaiyuan Sun; Jenny Chen; Cécile Viboud
Journal:  Lancet Digit Health       Date:  2020-02-20

6.  The Incubation Period of Coronavirus Disease 2019 (COVID-19) From Publicly Reported Confirmed Cases: Estimation and Application.

Authors:  Stephen A Lauer; Kyra H Grantz; Qifang Bi; Forrest K Jones; Qulu Zheng; Hannah R Meredith; Andrew S Azman; Nicholas G Reich; Justin Lessler
Journal:  Ann Intern Med       Date:  2020-03-10       Impact factor: 25.391

7.  An investigation of transmission control measures during the first 50 days of the COVID-19 epidemic in China.

Authors:  Huaiyu Tian; Yonghong Liu; Yidan Li; Chieh-Hsi Wu; Bin Chen; Moritz U G Kraemer; Bingying Li; Jun Cai; Bo Xu; Qiqi Yang; Ben Wang; Peng Yang; Yujun Cui; Yimeng Song; Pai Zheng; Quanyi Wang; Ottar N Bjornstad; Ruifu Yang; Bryan T Grenfell; Oliver G Pybus; Christopher Dye
Journal:  Science       Date:  2020-03-31       Impact factor: 47.728

8.  Risk for Transportation of Coronavirus Disease from Wuhan to Other Cities in China.

Authors:  Zhanwei Du; Lin Wang; Simon Cauchemez; Xiaoke Xu; Xianwen Wang; Benjamin J Cowling; Lauren Ancel Meyers
Journal:  Emerg Infect Dis       Date:  2020-05-17       Impact factor: 6.883

9.  Secondary attack rate and superspreading events for SARS-CoV-2.

Authors:  Yang Liu; Rosalind M Eggo; Adam J Kucharski
Journal:  Lancet       Date:  2020-02-27       Impact factor: 79.321

10.  Effects of Proactive Social Distancing on COVID-19 Outbreaks in 58 Cities, China.

Authors:  Zhanwei Du; Xiaoke Xu; Lin Wang; Spencer J Fox; Benjamin J Cowling; Alison P Galvani; Lauren Ancel Meyers
Journal:  Emerg Infect Dis       Date:  2020-06-09       Impact factor: 6.883

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  2 in total

1.  Linking genomic and epidemiologic information to advance the study of COVID-19.

Authors:  Yiwei Wang; Jiaxin Yang; Xinhao Zhuang; Yunchao Ling; Ruifang Cao; Qingwei Xu; Peng Wang; Ping Xu; Guoqing Zhang
Journal:  Sci Data       Date:  2022-03-30       Impact factor: 6.444

2.  Epidemiologic information discovery from open-access COVID-19 case reports via pretrained language model.

Authors:  Zhizheng Wang; Xiao Fan Liu; Zhanwei Du; Lin Wang; Ye Wu; Petter Holme; Michael Lachmann; Hongfei Lin; Zoie S Y Wong; Xiao-Ke Xu; Yuanyuan Sun
Journal:  iScience       Date:  2022-09-05
  2 in total

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