Literature DB >> 33544646

Impact of CT convolution kernel on robustness of radiomic features for different lung diseases and tissue types.

Sarah Denzler1, Diem Vuong1, Marta Bogowicz1, Matea Pavic1, Thomas Frauenfelder2, Sandra Thierstein, Eric Innocents Eboulet3, Britta Maurer4, Janine Schniering4, Hubert Szymon Gabryś1, Isabelle Schmitt-Opitz5, Miklos Pless6, Robert Foerster1, Matthias Guckenberger1, Stephanie Tanadini-Lang1.   

Abstract

OBJECTIVES: In this study, we aimed to assess the impact of different CT reconstruction kernels on the stability of radiomic features and the transferability between different diseases and tissue types. Three lung diseases were evaluated, i.e. non-small cell lung cancer (NSCLC), malignant pleural mesothelioma (MPM) and interstitial lung disease related to systemic sclerosis (SSc-ILD) as well as four different tissue types, i.e. primary tumor, largest involved lymph node ipsilateral and contralateral lung.
METHODS: Pre-treatment non-contrast enhanced CT scans from 23 NSCLC, 10 MPM and 12 SSc-ILD patients were collected retrospectively. For each patient, CT scans were reconstructed using smooth and sharp kernel in filtered back projection. The regions of interest (ROIs) were contoured on the smooth kernel-based CT and transferred to the sharp kernel-based CT. The voxels were resized to the largest voxel dimension of each cohort. In total, 1386 features were analyzed. Feature stability was assessed using the intraclass correlation coefficient. Features above the stability threshold >0.9 were considered stable.
RESULTS: We observed a strong impact of the reconstruction method on stability of the features (at maximum 26% of the 1386 features were stable). Intensity features were the most stable followed by texture and wavelet features. The wavelet features showed a positive correlation between percentage of stable features and size of the ROI (R2 = 0.79, p = 0.005). Lymph node radiomics showed poorest stability (<10%) and lung radiomics the largest stability (26%). Robustness analysis done on the contralateral lung could to a large extent be transferred to the ipsilateral lung, and the overlap of stable lung features between different lung diseases was more than 50%. However, results of robustness studies cannot be transferred between tissue types, which was investigated in NSCLC and MPM patients; the overlap of stable features for lymph node and lung, as well as for primary tumor and lymph node was very small in both disease types.
CONCLUSION: The robustness of radiomic features is strongly affected by different reconstruction kernels. The effect is largely influenced by the tissue type and less by the disease type. ADVANCES IN KNOWLEDGE: The study presents to our knowledge the most complete analysis on the impact of convolution kernel on the robustness of CT-based radiomics for four relevant tissue types in three different lung diseases. .

Entities:  

Mesh:

Year:  2021        PMID: 33544646      PMCID: PMC8010534          DOI: 10.1259/bjr.20200947

Source DB:  PubMed          Journal:  Br J Radiol        ISSN: 0007-1285            Impact factor:   3.039


  39 in total

1.  Interchangeability of radiomic features between [18F]-FDG PET/CT and [18F]-FDG PET/MR.

Authors:  Diem Vuong; Stephanie Tanadini-Lang; Martin W Huellner; Patrick Veit-Haibach; Jan Unkelbach; Nicolaus Andratschke; Johannes Kraft; Matthias Guckenberger; Marta Bogowicz
Journal:  Med Phys       Date:  2019-02-22       Impact factor: 4.071

Review 2.  Imaging in pleural mesothelioma: A review of the 14th International Conference of the International Mesothelioma Interest Group.

Authors:  Samuel G Armato; Roslyn J Francis; Sharyn I Katz; Guntulu Ak; Isabelle Opitz; Eyjolfur Gudmundsson; Kevin G Blyth; Ashish Gupta
Journal:  Lung Cancer       Date:  2018-11-28       Impact factor: 5.705

3.  Influence of inter-observer delineation variability on radiomics stability in different tumor sites.

Authors:  Matea Pavic; Marta Bogowicz; Xaver Würms; Stefan Glatz; Tobias Finazzi; Oliver Riesterer; Johannes Roesch; Leonie Rudofsky; Martina Friess; Patrick Veit-Haibach; Martin Huellner; Isabelle Opitz; Walter Weder; Thomas Frauenfelder; Matthias Guckenberger; Stephanie Tanadini-Lang
Journal:  Acta Oncol       Date:  2018-03-07       Impact factor: 4.089

4.  Radiomics of CT Features May Be Nonreproducible and Redundant: Influence of CT Acquisition Parameters.

Authors:  Roberto Berenguer; María Del Rosario Pastor-Juan; Jesús Canales-Vázquez; Miguel Castro-García; María Victoria Villas; Francisco Mansilla Legorburo; Sebastià Sabater
Journal:  Radiology       Date:  2018-04-24       Impact factor: 11.105

Review 5.  Radiomics: extracting more information from medical images using advanced feature analysis.

Authors:  Philippe Lambin; Emmanuel Rios-Velazquez; Ralph Leijenaar; Sara Carvalho; Ruud G P M van Stiphout; Patrick Granton; Catharina M L Zegers; Robert Gillies; Ronald Boellard; André Dekker; Hugo J W L Aerts
Journal:  Eur J Cancer       Date:  2012-01-16       Impact factor: 9.162

6.  Comparison of robust to standardized CT radiomics models to predict overall survival for non-small cell lung cancer patients.

Authors:  Diem Vuong; Marta Bogowicz; Sarah Denzler; Carol Oliveira; Robert Foerster; Florian Amstutz; Hubert S Gabryś; Jan Unkelbach; Sven Hillinger; Sandra Thierstein; Alexandros Xyrafas; Solange Peters; Miklos Pless; Matthias Guckenberger; Stephanie Tanadini-Lang
Journal:  Med Phys       Date:  2020-07-13       Impact factor: 4.071

7.  Effects of contrast-enhancement, reconstruction slice thickness and convolution kernel on the diagnostic performance of radiomics signature in solitary pulmonary nodule.

Authors:  Lan He; Yanqi Huang; Zelan Ma; Cuishan Liang; Changhong Liang; Zaiyi Liu
Journal:  Sci Rep       Date:  2016-10-10       Impact factor: 4.379

8.  Impact of Reconstruction Algorithms on CT Radiomic Features of Pulmonary Tumors: Analysis of Intra- and Inter-Reader Variability and Inter-Reconstruction Algorithm Variability.

Authors:  Hyungjin Kim; Chang Min Park; Myunghee Lee; Sang Joon Park; Yong Sub Song; Jong Hyuk Lee; Eui Jin Hwang; Jin Mo Goo
Journal:  PLoS One       Date:  2016-10-14       Impact factor: 3.240

9.  Assessing robustness of radiomic features by image perturbation.

Authors:  Alex Zwanenburg; Stefan Leger; Linda Agolli; Karoline Pilz; Esther G C Troost; Christian Richter; Steffen Löck
Journal:  Sci Rep       Date:  2019-01-24       Impact factor: 4.379

10.  The Image Biomarker Standardization Initiative: Standardized Quantitative Radiomics for High-Throughput Image-based Phenotyping.

Authors:  Alex Zwanenburg; Martin Vallières; Mahmoud A Abdalah; Hugo J W L Aerts; Vincent Andrearczyk; Aditya Apte; Saeed Ashrafinia; Spyridon Bakas; Roelof J Beukinga; Ronald Boellaard; Marta Bogowicz; Luca Boldrini; Irène Buvat; Gary J R Cook; Christos Davatzikos; Adrien Depeursinge; Marie-Charlotte Desseroit; Nicola Dinapoli; Cuong Viet Dinh; Sebastian Echegaray; Issam El Naqa; Andriy Y Fedorov; Roberto Gatta; Robert J Gillies; Vicky Goh; Michael Götz; Matthias Guckenberger; Sung Min Ha; Mathieu Hatt; Fabian Isensee; Philippe Lambin; Stefan Leger; Ralph T H Leijenaar; Jacopo Lenkowicz; Fiona Lippert; Are Losnegård; Klaus H Maier-Hein; Olivier Morin; Henning Müller; Sandy Napel; Christophe Nioche; Fanny Orlhac; Sarthak Pati; Elisabeth A G Pfaehler; Arman Rahmim; Arvind U K Rao; Jonas Scherer; Muhammad Musib Siddique; Nanna M Sijtsema; Jairo Socarras Fernandez; Emiliano Spezi; Roel J H M Steenbakkers; Stephanie Tanadini-Lang; Daniela Thorwarth; Esther G C Troost; Taman Upadhaya; Vincenzo Valentini; Lisanne V van Dijk; Joost van Griethuysen; Floris H P van Velden; Philip Whybra; Christian Richter; Steffen Löck
Journal:  Radiology       Date:  2020-03-10       Impact factor: 29.146

View more
  4 in total

1.  CT Reconstruction Kernels and the Effect of Pre- and Post-Processing on the Reproducibility of Handcrafted Radiomic Features.

Authors:  Turkey Refaee; Zohaib Salahuddin; Yousif Widaatalla; Sergey Primakov; Henry C Woodruff; Roland Hustinx; Felix M Mottaghy; Abdalla Ibrahim; Philippe Lambin
Journal:  J Pers Med       Date:  2022-03-31

2.  CT Texture Analysis of Pulmonary Neuroendocrine Tumors-Associations with Tumor Grading and Proliferation.

Authors:  Hans-Jonas Meyer; Jakob Leonhardi; Anne Kathrin Höhn; Johanna Pappisch; Hubert Wirtz; Timm Denecke; Armin Frille
Journal:  J Clin Med       Date:  2021-11-26       Impact factor: 4.241

3.  Inter-Observer Agreement between Low-Dose and Standard-Dose CT with Soft and Sharp Convolution Kernels in COVID-19 Pneumonia.

Authors:  Ivan Blokhin; Victor Gombolevskiy; Valeria Chernina; Maxim Gusev; Pavel Gelezhe; Olga Aleshina; Alexander Nikolaev; Nicholas Kulberg; Sergey Morozov; Roman Reshetnikov
Journal:  J Clin Med       Date:  2022-01-27       Impact factor: 4.241

4.  MaasPenn Radiomics Reproducibility Score: A Novel Quantitative Measure for Evaluating the Reproducibility of CT-Based Handcrafted Radiomic Features.

Authors:  Abdalla Ibrahim; Bruno Barufaldi; Turkey Refaee; Telmo M Silva Filho; Raymond J Acciavatti; Zohaib Salahuddin; Roland Hustinx; Felix M Mottaghy; Andrew D A Maidment; Philippe Lambin
Journal:  Cancers (Basel)       Date:  2022-03-22       Impact factor: 6.639

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.