Literature DB >> 33542415

Gene regulation contributes to explain the impact of early life socioeconomic disadvantage on adult inflammatory levels in two cohort studies.

Cristian Carmeli1,2, Zoltán Kutalik3,4, Pashupati P Mishra5, Eleonora Porcu3,4,6, Cyrille Delpierre7, Olivier Delaneau8, Michelle Kelly-Irving7, Murielle Bochud3, Nasser A Dhayat9, Belen Ponte10, Menno Pruijm11, Georg Ehret12, Mika Kähönen13, Terho Lehtimäki5, Olli T Raitakari14,15,16, Paolo Vineis17, Mika Kivimäki18, Marc Chadeau-Hyam17, Emmanouil Dermitzakis19, Nicolas Vuilleumier20, Silvia Stringhini3,21.   

Abstract

Individuals experiencing socioeconomic disadvantage in childhood have a higher rate of inflammation-related diseases decades later. Little is known about the mechanisms linking early life experiences to the functioning of the immune system in adulthood. To address this, we explore the relationship across social-to-biological layers of early life social exposures on levels of adulthood inflammation and the mediating role of gene regulatory mechanisms, epigenetic and transcriptomic profiling from blood, in 2,329 individuals from two European cohort studies. Consistently across both studies, we find transcriptional activity explains a substantive proportion (78% and 26%) of the estimated effect of early life disadvantaged social exposures on levels of adulthood inflammation. Furthermore, we show that mechanisms other than cis DNA methylation may regulate those transcriptional fingerprints. These results further our understanding of social-to-biological transitions by pinpointing the role of gene regulation that cannot fully be explained by differential cis DNA methylation.

Entities:  

Year:  2021        PMID: 33542415      PMCID: PMC7862626          DOI: 10.1038/s41598-021-82714-2

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  40 in total

Review 1.  Reciprocal regulation of the neural and innate immune systems.

Authors:  Michael R Irwin; Steven W Cole
Journal:  Nat Rev Immunol       Date:  2011-08-05       Impact factor: 53.106

2.  Flexible Mediation Analysis With Multiple Mediators.

Authors:  Johan Steen; Tom Loeys; Beatrijs Moerkerke; Stijn Vansteelandt
Journal:  Am J Epidemiol       Date:  2017-07-15       Impact factor: 4.897

3.  Estimating Outcome-Exposure Associations when Exposure Biomarker Detection Limits vary Across Batches.

Authors:  Jonathan Boss; Bhramar Mukherjee; Kelly K Ferguson; Amira Aker; Akram N Alshawabkeh; José F Cordero; John D Meeker; Sehee Kim
Journal:  Epidemiology       Date:  2019-09       Impact factor: 4.822

4.  The Peril of Power: A Tutorial on Using Simulation to Better Understand When and How We Can Estimate Mediating Effects.

Authors:  Kara E Rudolph; Dana E Goin; Elizabeth A Stuart
Journal:  Am J Epidemiol       Date:  2020-12-01       Impact factor: 4.897

5.  Multi-cohort study identifies social determinants of systemic inflammation over the life course.

Authors:  Eloïse Berger; Raphaële Castagné; Marc Chadeau-Hyam; Murielle Bochud; Angelo d'Errico; Martina Gandini; Maryam Karimi; Mika Kivimäki; Vittorio Krogh; Michael Marmot; Salvatore Panico; Martin Preisig; Fulvio Ricceri; Carlotta Sacerdote; Andrew Steptoe; Silvia Stringhini; Rosario Tumino; Paolo Vineis; Cyrille Delpierre; Michelle Kelly-Irving
Journal:  Nat Commun       Date:  2019-02-15       Impact factor: 14.919

6.  g:Profiler: a web server for functional enrichment analysis and conversions of gene lists (2019 update).

Authors:  Uku Raudvere; Liis Kolberg; Ivan Kuzmin; Tambet Arak; Priit Adler; Hedi Peterson; Jaak Vilo
Journal:  Nucleic Acids Res       Date:  2019-07-02       Impact factor: 16.971

7.  Passive and active DNA methylation and the interplay with genetic variation in gene regulation.

Authors:  Maria Gutierrez-Arcelus; Tuuli Lappalainen; Stephen B Montgomery; Alfonso Buil; Halit Ongen; Alisa Yurovsky; Julien Bryois; Thomas Giger; Luciana Romano; Alexandra Planchon; Emilie Falconnet; Deborah Bielser; Maryline Gagnebin; Ismael Padioleau; Christelle Borel; Audrey Letourneau; Periklis Makrythanasis; Michel Guipponi; Corinne Gehrig; Stylianos E Antonarakis; Emmanouil T Dermitzakis
Journal:  Elife       Date:  2013-06-04       Impact factor: 8.140

Review 8.  Human social genomics.

Authors:  Steven W Cole
Journal:  PLoS Genet       Date:  2014-08-28       Impact factor: 5.917

9.  Assessing the suitability of summary data for two-sample Mendelian randomization analyses using MR-Egger regression: the role of the I2 statistic.

Authors:  Jack Bowden; Fabiola Del Greco M; Cosetta Minelli; George Davey Smith; Nuala A Sheehan; John R Thompson
Journal:  Int J Epidemiol       Date:  2016-12-01       Impact factor: 7.196

10.  Socioeconomic status and the 25 × 25 risk factors as determinants of premature mortality: a multicohort study and meta-analysis of 1·7 million men and women.

Authors:  Silvia Stringhini; Cristian Carmeli; Markus Jokela; Mauricio Avendaño; Peter Muennig; Florence Guida; Fulvio Ricceri; Angelo d'Errico; Henrique Barros; Murielle Bochud; Marc Chadeau-Hyam; Françoise Clavel-Chapelon; Giuseppe Costa; Cyrille Delpierre; Silvia Fraga; Marcel Goldberg; Graham G Giles; Vittorio Krogh; Michelle Kelly-Irving; Richard Layte; Aurélie M Lasserre; Michael G Marmot; Martin Preisig; Martin J Shipley; Peter Vollenweider; Marie Zins; Ichiro Kawachi; Andrew Steptoe; Johan P Mackenbach; Paolo Vineis; Mika Kivimäki
Journal:  Lancet       Date:  2017-02-01       Impact factor: 202.731

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  3 in total

Review 1.  Social Determinants of Cardiovascular Disease.

Authors:  Tiffany M Powell-Wiley; Yvonne Baumer; Foster Osei Baah; Andrew S Baez; Nicole Farmer; Christa T Mahlobo; Mario A Pita; Kameswari A Potharaju; Kosuke Tamura; Gwenyth R Wallen
Journal:  Circ Res       Date:  2022-03-03       Impact factor: 17.367

2.  Omics-informed CNV calls reduce false-positive rates and improve power for CNV-trait associations.

Authors:  Maarja Lepamets; Chiara Auwerx; Margit Nõukas; Annique Claringbould; Eleonora Porcu; Mart Kals; Tuuli Jürgenson; Andrew Paul Morris; Urmo Võsa; Murielle Bochud; Silvia Stringhini; Cisca Wijmenga; Lude Franke; Hedi Peterson; Jaak Vilo; Kaido Lepik; Reedik Mägi; Zoltán Kutalik
Journal:  HGG Adv       Date:  2022-08-01

3.  Evaluating the Continued Integration of Genetics into Medical Sociology.

Authors:  Jason D Boardman; Jason M Fletcher
Journal:  J Health Soc Behav       Date:  2021-08-06
  3 in total

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