Literature DB >> 33541613

Integrative Omics to Characterize and Classify Pulmonary Vascular Disease.

Jane A Leopold1, Anna R Hemnes2.   

Abstract

Advances in high-throughput biotechnologies have facilitated omics profiling, a key component of precision phenotyping, in patients with pulmonary vascular disease. Omics provides comprehensive information pertaining to genes, transcripts, proteins, and metabolites. The resulting omics big datasets may be integrated for more robust results and are amenable to analysis using machine learning or newer analytical methodologies, such as network analysis. Results from fully integrated multi-omics datasets combined with clinical data are poised to provide novel insight into pulmonary vascular disease as well as diagnose the presence of disease and prognosticate outcomes.
Copyright © 2020 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Genomics; Metabolomics; Network analysis; Precision medicine; Proteomics; Pulmonary hypertension; Transcriptomics

Mesh:

Year:  2021        PMID: 33541613      PMCID: PMC7875152          DOI: 10.1016/j.ccm.2020.10.001

Source DB:  PubMed          Journal:  Clin Chest Med        ISSN: 0272-5231            Impact factor:   2.878


  74 in total

Review 1.  Emerging Role of Precision Medicine in Cardiovascular Disease.

Authors:  Jane A Leopold; Joseph Loscalzo
Journal:  Circ Res       Date:  2018-04-27       Impact factor: 17.367

2.  Skeletal muscle proteomic signature and metabolic impairment in pulmonary hypertension.

Authors:  Simon Malenfant; François Potus; Frédéric Fournier; Sandra Breuils-Bonnet; Aude Pflieger; Sylvie Bourassa; Ève Tremblay; Benjamin Nehmé; Arnaud Droit; Sébastien Bonnet; Steeve Provencher
Journal:  J Mol Med (Berl)       Date:  2014-12-30       Impact factor: 4.599

3.  RNA Sequencing Analysis Detection of a Novel Pathway of Endothelial Dysfunction in Pulmonary Arterial Hypertension.

Authors:  Christopher J Rhodes; Hogune Im; Aiqin Cao; Jan K Hennigs; Lingli Wang; Silin Sa; Pin-I Chen; Nils P Nickel; Kazuya Miyagawa; Rachel K Hopper; Nancy F Tojais; Caiyun G Li; Mingxia Gu; Edda Spiekerkoetter; Zhaoying Xian; Rui Chen; Mingming Zhao; Mark Kaschwich; Patricia A Del Rosario; Daniel Bernstein; Roham T Zamanian; Joseph C Wu; Michael P Snyder; Marlene Rabinovitch
Journal:  Am J Respir Crit Care Med       Date:  2015-08-01       Impact factor: 21.405

4.  Omics, big data and machine learning as tools to propel understanding of biological mechanisms and to discover novel diagnostics and therapeutics.

Authors:  Nikolaos Perakakis; Alireza Yazdani; George E Karniadakis; Christos Mantzoros
Journal:  Metabolism       Date:  2018-08-08       Impact factor: 8.694

5.  Metabolic disturbances identified in plasma are associated with outcomes in patients with heart failure: diagnostic and prognostic value of metabolomics.

Authors:  Mei-Ling Cheng; Chao-Hung Wang; Ming-Shi Shiao; Min-Hui Liu; Yu-Yen Huang; Cheng-Yu Huang; Chun-Tai Mao; Jui-Fen Lin; Hung-Yao Ho; Ning-I Yang
Journal:  J Am Coll Cardiol       Date:  2015-04-21       Impact factor: 24.094

6.  Metabolic Profiling of Right Ventricular-Pulmonary Vascular Function Reveals Circulating Biomarkers of Pulmonary Hypertension.

Authors:  Gregory D Lewis; Debby Ngo; Anna R Hemnes; Laurie Farrell; Carly Domos; Paul P Pappagianopoulos; Bishnu P Dhakal; Amanda Souza; Xu Shi; Meredith E Pugh; Arkadi Beloiartsev; Sumita Sinha; Clary B Clish; Robert E Gerszten
Journal:  J Am Coll Cardiol       Date:  2016-01-19       Impact factor: 24.094

7.  Genome-wide association analysis identifies a susceptibility locus for pulmonary arterial hypertension.

Authors:  Marine Germain; Mélanie Eyries; David Montani; Odette Poirier; Barbara Girerd; Peter Dorfmüller; Florence Coulet; Sophie Nadaud; Svetlana Maugenre; Christophe Guignabert; Wassila Carpentier; Anton Vonk-Noordegraaf; Marilyne Lévy; Ari Chaouat; Jean-Charles Lambert; Marion Bertrand; Anne-Marie Dupuy; Luc Letenneur; Mark Lathrop; Philippe Amouyel; Thomy J L de Ravel; Marion Delcroix; Eric D Austin; Ivan M Robbins; Anna R Hemnes; James E Loyd; Erika Berman-Rosenzweig; Robyn J Barst; Wendy K Chung; Gerald Simonneau; David A Trégouët; Marc Humbert; Florent Soubrier
Journal:  Nat Genet       Date:  2013-03-17       Impact factor: 38.330

8.  Evidence for right ventricular lipotoxicity in heritable pulmonary arterial hypertension.

Authors:  Anna R Hemnes; Evan L Brittain; Aaron W Trammell; Joshua P Fessel; Eric D Austin; Niki Penner; Karen B Maynard; Linda Gleaves; Megha Talati; Tarek Absi; Thomas Disalvo; James West
Journal:  Am J Respir Crit Care Med       Date:  2014-02-01       Impact factor: 21.405

9.  Systems Biology and Multi-Omics Integration: Viewpoints from the Metabolomics Research Community.

Authors:  Farhana R Pinu; David J Beale; Amy M Paten; Konstantinos Kouremenos; Sanjay Swarup; Horst J Schirra; David Wishart
Journal:  Metabolites       Date:  2019-04-18

10.  Remodeling of active endothelial enhancers is associated with aberrant gene-regulatory networks in pulmonary arterial hypertension.

Authors:  Armando Reyes-Palomares; Mingxia Gu; Fabian Grubert; Ivan Berest; Silin Sa; Maya Kasowski; Christian Arnold; Mao Shuai; Rohith Srivas; Simon Miao; Dan Li; Michael P Snyder; Marlene Rabinovitch; Judith B Zaugg
Journal:  Nat Commun       Date:  2020-04-03       Impact factor: 17.694

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