Literature DB >> 33538216

Environmental DNA bioassays corroborate field data for detection of overwintering species at risk Blanding's turtles (Emydoidea blandingii).

Scott A Tarof1, Steven Crookes2, Kelsey Moxley3, Jeff Hathaway3, Graham Cameron4, Robert H Hanner5.   

Abstract

Environmental DNA (eDNA) is gaining traction in conservation ecology as a powerful tool for detecting species at risk. We developed a quantitative polymerase chain reaction assay to detect a DNA amplicon fragment of the mitochondrial nicotinamide adenine dinucleotide locus of the Blanding's turtle (Emydoidea blandingii) for detecting overwintering individuals. Seventy-eight water samples were collected from 17 wetland sites in Ontario, Canada. We used traditional field data to identify a priori positive and negative control sites. Fifty percent of positive control sites amplified. Detection was related to the number of individuals estimated from field observations in at least one region surveyed. Positive control sites had lower total dissolved solids and electrical conductivity in relation to negative control sites. Shedding rates were within the same order of magnitude for brumating and active turtles. We recommend collecting additional samples at a larger number of locations to maximize detection. Recommended sampling design changes may overshadow the additional effects of water chemistry and low eDNA shedding rates. eDNA offers tremendous potential to practitioners conducting species at risk assessments in environmental consulting by providing a faster, more efficient method of detection compared with traditional surveys.

Entities:  

Keywords:  ADN environnemental; Blanding’s turtle; ecology of eDNA; environmental DNA; espèces menacées; probability; probabilité; species at risk; tortue mouchetée; écologie de l’ADNe

Year:  2021        PMID: 33538216     DOI: 10.1139/gen-2020-0043

Source DB:  PubMed          Journal:  Genome        ISSN: 0831-2796            Impact factor:   2.166


  2 in total

1.  Environmental DNA analysis confirms extant populations of the cryptic Irwin's turtle within its historical range.

Authors:  Cecilia Villacorta-Rath; Thomas Espinoza; Bernie Cockayne; Jason Schaffer; Damien Burrows
Journal:  BMC Ecol Evol       Date:  2022-05-02

Review 2.  A review of applications of environmental DNA for reptile conservation and management.

Authors:  Bethany Nordstrom; Nicola Mitchell; Margaret Byrne; Simon Jarman
Journal:  Ecol Evol       Date:  2022-06-05       Impact factor: 3.167

  2 in total

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