Literature DB >> 33536493

Evidence for strong environmental control on bacterial microbiomes of Antarctic springtails.

Chiara Leo1,2, Francesco Nardi3, Claudio Cucini3, Francesco Frati3, Peter Convey4, James T Weedon5, Dick Roelofs6, Antonio Carapelli3.   

Abstract

Collembola are a key component of the soil biota globally, playing an important role in community and ecosystem dynamics. Equally significant are their associated microbiomes, that can contribute to key metabolic functions. In the present study, we investigated the bacterial community composition of four Antarctic springtail species to assess if and how the extreme Antarctic environment has shaped the collembolans' microbiomes. Springtails were collected from two biogeographical regions, the maritime and the continental Antarctic. From each region, two endemic species, belonging to the genera Cryptopygus (Isotomidae, Entomobryomorpha) and Friesea (Neanuridae, Poduromorpha), were included. This experimental design allowed us to quantify the relative importance of ecological factors (different regions of occurrence) and/or phylogenetic divergence in the host (different Orders) in shaping the Collembola microbiome. The diversity and richness of springtail microbiomes was lower in the Antarctic taxa compared to published information from species from temperate regions. The microbiome composition was predominantly species-specific, with a limited core microbiome shared across the four species examined. While both geographic origin and host species influenced the associated microbiomes, the former was the prevalent driver, with closer similarity between springtails from the same bioregion than between those belonging to the same genus.

Entities:  

Year:  2021        PMID: 33536493     DOI: 10.1038/s41598-021-82379-x

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  15 in total

1.  Soil bacterial diversity in the Arctic is not fundamentally different from that found in other biomes.

Authors:  Haiyan Chu; Noah Fierer; Christian L Lauber; J G Caporaso; Rob Knight; Paul Grogan
Journal:  Environ Microbiol       Date:  2010-11       Impact factor: 5.491

Review 2.  As the worm turns: the earthworm gut as a transient habitat for soil microbial biomes.

Authors:  Harold L Drake; Marcus A Horn
Journal:  Annu Rev Microbiol       Date:  2007       Impact factor: 15.500

3.  Hidden levels of phylodiversity in Antarctic green algae: further evidence for the existence of glacial refugia.

Authors:  Aaike De Wever; Frederik Leliaert; Elie Verleyen; Pieter Vanormelingen; Katleen Van der Gucht; Dominic A Hodgson; Koen Sabbe; Wim Vyverman
Journal:  Proc Biol Sci       Date:  2009-07-22       Impact factor: 5.349

Review 4.  The changing form of Antarctic biodiversity.

Authors:  Steven L Chown; Andrew Clarke; Ceridwen I Fraser; S Craig Cary; Katherine L Moon; Melodie A McGeoch
Journal:  Nature       Date:  2015-06-25       Impact factor: 49.962

5.  Ecological drivers of soil microbial diversity and soil biological networks in the Southern Hemisphere.

Authors:  Manuel Delgado-Baquerizo; Frank Reith; Paul G Dennis; Kelly Hamonts; Jeff R Powell; Andrew Young; Brajesh K Singh; Andrew Bissett
Journal:  Ecology       Date:  2018-02-12       Impact factor: 5.499

6.  The Microbial Community of Tardigrades: Environmental Influence and Species Specificity of Microbiome Structure and Composition.

Authors:  Matteo Vecchi; Irene L G Newton; Michele Cesari; Lorena Rebecchi; Roberto Guidetti
Journal:  Microb Ecol       Date:  2018-01-15       Impact factor: 4.552

7.  Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2.

Authors:  Evan Bolyen; Jai Ram Rideout; Matthew R Dillon; Nicholas A Bokulich; Christian C Abnet; Gabriel A Al-Ghalith; Harriet Alexander; Eric J Alm; Manimozhiyan Arumugam; Francesco Asnicar; Yang Bai; Jordan E Bisanz; Kyle Bittinger; Asker Brejnrod; Colin J Brislawn; C Titus Brown; Benjamin J Callahan; Andrés Mauricio Caraballo-Rodríguez; John Chase; Emily K Cope; Ricardo Da Silva; Christian Diener; Pieter C Dorrestein; Gavin M Douglas; Daniel M Durall; Claire Duvallet; Christian F Edwardson; Madeleine Ernst; Mehrbod Estaki; Jennifer Fouquier; Julia M Gauglitz; Sean M Gibbons; Deanna L Gibson; Antonio Gonzalez; Kestrel Gorlick; Jiarong Guo; Benjamin Hillmann; Susan Holmes; Hannes Holste; Curtis Huttenhower; Gavin A Huttley; Stefan Janssen; Alan K Jarmusch; Lingjing Jiang; Benjamin D Kaehler; Kyo Bin Kang; Christopher R Keefe; Paul Keim; Scott T Kelley; Dan Knights; Irina Koester; Tomasz Kosciolek; Jorden Kreps; Morgan G I Langille; Joslynn Lee; Ruth Ley; Yong-Xin Liu; Erikka Loftfield; Catherine Lozupone; Massoud Maher; Clarisse Marotz; Bryan D Martin; Daniel McDonald; Lauren J McIver; Alexey V Melnik; Jessica L Metcalf; Sydney C Morgan; Jamie T Morton; Ahmad Turan Naimey; Jose A Navas-Molina; Louis Felix Nothias; Stephanie B Orchanian; Talima Pearson; Samuel L Peoples; Daniel Petras; Mary Lai Preuss; Elmar Pruesse; Lasse Buur Rasmussen; Adam Rivers; Michael S Robeson; Patrick Rosenthal; Nicola Segata; Michael Shaffer; Arron Shiffer; Rashmi Sinha; Se Jin Song; John R Spear; Austin D Swafford; Luke R Thompson; Pedro J Torres; Pauline Trinh; Anupriya Tripathi; Peter J Turnbaugh; Sabah Ul-Hasan; Justin J J van der Hooft; Fernando Vargas; Yoshiki Vázquez-Baeza; Emily Vogtmann; Max von Hippel; William Walters; Yunhu Wan; Mingxun Wang; Jonathan Warren; Kyle C Weber; Charles H D Williamson; Amy D Willis; Zhenjiang Zech Xu; Jesse R Zaneveld; Yilong Zhang; Qiyun Zhu; Rob Knight; J Gregory Caporaso
Journal:  Nat Biotechnol       Date:  2019-08       Impact factor: 54.908

8.  A snapshot of biodiversity protection in Antarctica.

Authors:  Hannah S Wauchope; Justine D Shaw; Aleks Terauds
Journal:  Nat Commun       Date:  2019-02-26       Impact factor: 14.919

9.  Trimmomatic: a flexible trimmer for Illumina sequence data.

Authors:  Anthony M Bolger; Marc Lohse; Bjoern Usadel
Journal:  Bioinformatics       Date:  2014-04-01       Impact factor: 6.937

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