Literature DB >> 33534821

Biallelic loss-of-function in NRAP is a cause of recessive dilated cardiomyopathy.

Juha W Koskenvuo1, Inka Saarinen1, Saija Ahonen1, Johanna Tommiska1, Sini Weckström2, Eija H Seppälä1, Sari Tuupanen1, Tiia Kangas-Kontio1, Jennifer Schleit1, Krista Heliö1, Julie Hathaway3, Anders Gummesson4, Pia Dahlberg5, Tiina H Ojala6, Ville Vepsäläinen7, Ville Kytölä1, Mikko Muona1, Johanna Sistonen1, Pertteli Salmenperä1, Massimiliano Gentile1, Jussi Paananen1, Samuel Myllykangas1, Tero-Pekka Alastalo3, Tiina Heliö2.   

Abstract

BACKGROUND: Familial dilated cardiomyopathy (DCM) is typically a monogenic disorder with dominant inheritance. Although over 40 genes have been linked to DCM, more than half of the patients undergoing comprehensive genetic testing are left without molecular diagnosis. Recently, biallelic protein-truncating variants (PTVs) in the nebulin-related anchoring protein gene (NRAP) were identified in a few patients with sporadic DCM. METHODS AND
RESULTS: We determined the frequency of rare NRAP variants in a cohort of DCM patients and control patients to further evaluate role of this gene in cardiomyopathies. A retrospective analysis of our internal variant database consisting of 31,639 individuals who underwent genetic testing (either panel or direct exome sequencing) was performed. The DCM group included 577 patients with either a confirmed or suspected DCM diagnosis. A control cohort of 31,062 individuals, including 25,912 individuals with non-cardiac (control group) and 5,150 with non-DCM cardiac indications (Non-DCM cardiac group). Biallelic (n = 6) or two (n = 5) NRAP variants (two PTVs or PTV+missense) were identified in 11 unrelated probands with DCM (1.9%) but none of the controls. None of the 11 probands had an alternative molecular diagnosis. Family member testing supports co-segregation. Biallelic or potentially biallelic NRAP variants were enriched in DCM vs. controls (OR 1052, p<0.0001). Based on the frequency of NRAP PTVs in the gnomAD reference population, and predicting full penetrance, biallelic NRAP variants could explain 0.25%-2.46% of all DCM cases.
CONCLUSION: Loss-of-function in NRAP is a cause for autosomal recessive dilated cardiomyopathy, supporting its inclusion in comprehensive genetic testing.

Entities:  

Year:  2021        PMID: 33534821      PMCID: PMC7857588          DOI: 10.1371/journal.pone.0245681

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.240


  30 in total

1.  Molecular interactions of N-RAP, a nebulin-related protein of striated muscle myotendon junctions and intercalated disks.

Authors:  G Luo; A H Herrera; R Horowits
Journal:  Biochemistry       Date:  1999-05-11       Impact factor: 3.162

2.  PLEKHM2 mutation leads to abnormal localization of lysosomes, impaired autophagy flux and associates with recessive dilated cardiomyopathy and left ventricular noncompaction.

Authors:  Emad Muhammad; Aviva Levitas; Sonia R Singh; Alex Braiman; Rivka Ofir; Sharon Etzion; Val C Sheffield; Yoram Etzion; Lucie Carrier; Ruti Parvari
Journal:  Hum Mol Genet       Date:  2015-10-12       Impact factor: 6.150

Review 3.  Overview of the Muscle Cytoskeleton.

Authors:  Christine A Henderson; Christopher G Gomez; Stefanie M Novak; Lei Mi-Mi; Carol C Gregorio
Journal:  Compr Physiol       Date:  2017-06-18       Impact factor: 9.090

Review 4.  Dilated cardiomyopathy: a disease of the intercalated disc?

Authors:  Jean-Claude Perriard; Alain Hirschy; Elisabeth Ehler
Journal:  Trends Cardiovasc Med       Date:  2003-01       Impact factor: 6.677

5.  Epidemiology of idiopathic dilated and hypertrophic cardiomyopathy. A population-based study in Olmsted County, Minnesota, 1975-1984.

Authors:  M B Codd; D D Sugrue; B J Gersh; L J Melton
Journal:  Circulation       Date:  1989-09       Impact factor: 29.690

6.  Biallelic Truncating Mutations in ALPK3 Cause Severe Pediatric Cardiomyopathy.

Authors:  Rowida Almomani; Judith M A Verhagen; Johanna C Herkert; Erwin Brosens; Karin Y van Spaendonck-Zwarts; Angeliki Asimaki; Paul A van der Zwaag; Ingrid M E Frohn-Mulder; Aida M Bertoli-Avella; Ludolf G Boven; Marjon A van Slegtenhorst; Jasper J van der Smagt; Wilfred F J van IJcken; Bert Timmer; Margriet van Stuijvenberg; Rob M Verdijk; Jeffrey E Saffitz; Frederik A du Plessis; Michelle Michels; Robert M W Hofstra; Richard J Sinke; J Peter van Tintelen; Marja W Wessels; Jan D H Jongbloed; Ingrid M B H van de Laar
Journal:  J Am Coll Cardiol       Date:  2016-02-09       Impact factor: 24.094

7.  Reassessment of Mendelian gene pathogenicity using 7,855 cardiomyopathy cases and 60,706 reference samples.

Authors:  Roddy Walsh; Kate L Thomson; James S Ware; Birgit H Funke; Jessica Woodley; Karen J McGuire; Francesco Mazzarotto; Edward Blair; Anneke Seller; Jenny C Taylor; Eric V Minikel; Daniel G MacArthur; Martin Farrall; Stuart A Cook; Hugh Watkins
Journal:  Genet Med       Date:  2016-08-17       Impact factor: 8.822

8.  The landscape of genetic diseases in Saudi Arabia based on the first 1000 diagnostic panels and exomes.

Authors:  Dorota Monies; Mohamed Abouelhoda; Moeenaldeen AlSayed; Zuhair Alhassnan; Maha Alotaibi; Husam Kayyali; Mohammed Al-Owain; Ayaz Shah; Zuhair Rahbeeni; Mohammad A Al-Muhaizea; Hamad I Alzaidan; Edward Cupler; Saeed Bohlega; Eissa Faqeih; Maha Faden; Banan Alyounes; Dyala Jaroudi; Ewa Goljan; Hadeel Elbardisy; Asma Akilan; Renad Albar; Hesham Aldhalaan; Shamshad Gulab; Aziza Chedrawi; Bandar K Al Saud; Wesam Kurdi; Nawal Makhseed; Tahani Alqasim; Heba Y El Khashab; Hamoud Al-Mousa; Amal Alhashem; Imaduddin Kanaan; Talal Algoufi; Khalid Alsaleem; Talal A Basha; Fathiya Al-Murshedi; Sameena Khan; Adila Al-Kindy; Maha Alnemer; Sami Al-Hajjar; Suad Alyamani; Hasan Aldhekri; Ali Al-Mehaidib; Rand Arnaout; Omar Dabbagh; Mohammad Shagrani; Dieter Broering; Maha Tulbah; Amal Alqassmi; Maisoon Almugbel; Mohammed AlQuaiz; Abdulaziz Alsaman; Khalid Al-Thihli; Raashda A Sulaiman; Wajeeh Al-Dekhail; Abeer Alsaegh; Fahad A Bashiri; Alya Qari; Suzan Alhomadi; Hisham Alkuraya; Mohammed Alsebayel; Muddathir H Hamad; Laszlo Szonyi; Faisal Abaalkhail; Sulaiman M Al-Mayouf; Hamad Almojalli; Khalid S Alqadi; Hussien Elsiesy; Taghreed M Shuaib; Mohammed Zain Seidahmed; Ibraheem Abosoudah; Hana Akleh; Abdulaziz AlGhonaium; Turki M Alkharfy; Fuad Al Mutairi; Wafa Eyaid; Abdullah Alshanbary; Farrukh R Sheikh; Fahad I Alsohaibani; Abdullah Alsonbul; Saeed Al Tala; Soher Balkhy; Randa Bassiouni; Ahmed S Alenizi; Maged H Hussein; Saeed Hassan; Mohamed Khalil; Brahim Tabarki; Saad Alshahwan; Amira Oshi; Yasser Sabr; Saad Alsaadoun; Mustafa A Salih; Sarar Mohamed; Habiba Sultana; Abdullah Tamim; Moayad El-Haj; Saif Alshahrani; Dalal K Bubshait; Majid Alfadhel; Tariq Faquih; Mohamed El-Kalioby; Shazia Subhani; Zeeshan Shah; Nabil Moghrabi; Brian F Meyer; Fowzan S Alkuraya
Journal:  Hum Genet       Date:  2017-06-09       Impact factor: 4.132

9.  Homozygous truncating mutation in NRAP gene identified by whole exome sequencing in a patient with dilated cardiomyopathy.

Authors:  Grażyna T Truszkowska; Zofia T Bilińska; Angelika Muchowicz; Agnieszka Pollak; Anna Biernacka; Katarzyna Kozar-Kamińska; Piotr Stawiński; Piotr Gasperowicz; Joanna Kosińska; Tomasz Zieliński; Rafał Płoski
Journal:  Sci Rep       Date:  2017-06-13       Impact factor: 4.379

10.  PanelApp crowdsources expert knowledge to establish consensus diagnostic gene panels.

Authors:  Antonio Rueda Martin; Eleanor Williams; Rebecca E Foulger; Sarah Leigh; Louise C Daugherty; Olivia Niblock; Ivone U S Leong; Katherine R Smith; Oleg Gerasimenko; Eik Haraldsdottir; Ellen Thomas; Richard H Scott; Emma Baple; Arianna Tucci; Helen Brittain; Anna de Burca; Kristina Ibañez; Dalia Kasperaviciute; Damian Smedley; Mark Caulfield; Augusto Rendon; Ellen M McDonagh
Journal:  Nat Genet       Date:  2019-11       Impact factor: 38.330

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  1 in total

1.  Whole genome sequencing delineates regulatory, copy number, and cryptic splice variants in early onset cardiomyopathy.

Authors:  Robert Lesurf; Abdelrahman Said; Oyediran Akinrinade; Jeroen Breckpot; Kathleen Delfosse; Ting Liu; Roderick Yao; Gabrielle Persad; Fintan McKenna; Ramil R Noche; Winona Oliveros; Kaia Mattioli; Shreya Shah; Anastasia Miron; Qian Yang; Guoliang Meng; Michelle Chan Seng Yue; Wilson W L Sung; Bhooma Thiruvahindrapuram; Jane Lougheed; Erwin Oechslin; Tapas Mondal; Lynn Bergin; John Smythe; Shashank Jayappa; Vinay J Rao; Jayaprakash Shenthar; Perundurai S Dhandapany; Christopher Semsarian; Robert G Weintraub; Richard D Bagnall; Jodie Ingles; Marta Melé; Philipp G Maass; James Ellis; Stephen W Scherer; Seema Mital
Journal:  NPJ Genom Med       Date:  2022-03-14       Impact factor: 8.617

  1 in total

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