Literature DB >> 33534061

First isolation of Candida oceani from a clinical specimen.

Ka Lip Chew1, Sophie Octavia2, Jeanette W P Teo3.   

Abstract

We describe to our knowledge, the first documentation of Candida oceani isolate from human skin punch biopsy. Susceptibility testing was performed using Sensititre YeastOne YO10 microplate method and all common clinical antifungals appeared to have good activity against the isolate. Whole genome sequencing was also performed to provide a C. oceani draft genome.

Entities:  

Keywords:  Candida; Clinical microbiology; Halophilic; Whole genome sequencing; Yeast

Year:  2021        PMID： 33534061     DOI： 10.1007/s10482-020-01512-4

Source DB:  PubMed          Journal:  Antonie Van Leeuwenhoek        ISSN： 0003-6072            Impact factor:   2.271


  6 in total

Review 1.  Virulence factors of Candida albicans.

Authors:  R A Calderone; W A Fonzi
Journal:  Trends Microbiol       Date:  2001-07       Impact factor: 17.079

2.  kSNP3.0: SNP detection and phylogenetic analysis of genomes without genome alignment or reference genome.

Authors:  Shea N Gardner; Tom Slezak; Barry G Hall
Journal:  Bioinformatics       Date:  2015-04-25       Impact factor: 6.937

3.  QUAST: quality assessment tool for genome assemblies.

Authors:  Alexey Gurevich; Vladislav Saveliev; Nikolay Vyahhi; Glenn Tesler
Journal:  Bioinformatics       Date:  2013-02-19       Impact factor: 6.937

4.  Candida oceani sp. nov., a novel yeast isolated from a Mid-Atlantic Ridge hydrothermal vent (-2300 meters).

Authors:  Gaëtan Burgaud; Danielle Arzur; José Paulo Sampaio; Georges Barbier
Journal:  Antonie Van Leeuwenhoek       Date:  2011-02-27       Impact factor: 2.271

5.  Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads.

Authors:  Ryan R Wick; Louise M Judd; Claire L Gorrie; Kathryn E Holt
Journal:  PLoS Comput Biol       Date:  2017-06-08       Impact factor: 4.475

6.  RaGOO: fast and accurate reference-guided scaffolding of draft genomes.

Authors:  Michael Alonge; Sebastian Soyk; Srividya Ramakrishnan; Xingang Wang; Sara Goodwin; Fritz J Sedlazeck; Zachary B Lippman; Michael C Schatz
Journal:  Genome Biol       Date:  2019-10-28       Impact factor: 13.583
  6 in total

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