Literature DB >> 33531515

A quantum-inspired classifier for clonogenic assay evaluations.

Giuseppe Sergioli1, Carmelo Militello2, Leonardo Rundo3,4, Luigi Minafra2, Filippo Torrisi5, Giorgio Russo2, Keng Loon Chow6, Roberto Giuntini6,7.   

Abstract

Recent advances in Quantum Machine Learning (QML) have provided benefits to several computational processes, drastically reducing the time complexity. Another approach of combining quantum information theory with machine learning-without involving quantum computers-is known as Quantum-inspired Machine Learning (QiML), which exploits the expressive power of the quantum language to increase the accuracy of the process (rather than reducing the time complexity). In this work, we propose a large-scale experiment based on the application of a binary classifier inspired by quantum information theory to the biomedical imaging context in clonogenic assay evaluation to identify the most discriminative feature, allowing us to enhance cell colony segmentation. This innovative approach offers a two-fold result: (1) among the extracted and analyzed image features, homogeneity is shown to be a relevant feature in detecting challenging cell colonies; and (2) the proposed quantum-inspired classifier is a novel and outstanding methodology, compared to conventional machine learning classifiers, for the evaluation of clonogenic assays.

Entities:  

Year:  2021        PMID: 33531515     DOI: 10.1038/s41598-021-82085-8

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  10 in total

1.  Model-based automated detection of mammalian cell colonies.

Authors:  R Bernard; M Kanduser; F Pernus
Journal:  Phys Med Biol       Date:  2001-11       Impact factor: 3.609

2.  Automated counting of bacterial colonies by image analysis.

Authors:  Pei-Ju Chiang; Min-Jen Tseng; Zong-Sian He; Chia-Hsun Li
Journal:  J Microbiol Methods       Date:  2014-11-21       Impact factor: 2.363

3.  Machine learning in quantum spaces.

Authors:  Maria Schuld
Journal:  Nature       Date:  2019-03       Impact factor: 49.962

4.  Area-based cell colony surviving fraction evaluation: A novel fully automatic approach using general-purpose acquisition hardware.

Authors:  Carmelo Militello; Leonardo Rundo; Vincenzo Conti; Luigi Minafra; Francesco Paolo Cammarata; Giancarlo Mauri; Maria Carla Gilardi; Nunziatina Porcino
Journal:  Comput Biol Med       Date:  2017-09-06       Impact factor: 4.589

5.  Quantum machine learning.

Authors:  Jacob Biamonte; Peter Wittek; Nicola Pancotti; Patrick Rebentrost; Nathan Wiebe; Seth Lloyd
Journal:  Nature       Date:  2017-09-13       Impact factor: 49.962

6.  Automated counting of mammalian cell colonies.

Authors:  P R Barber; B Vojnovic; J Kelly; C R Mayes; P Boulton; M Woodcock; M C Joiner
Journal:  Phys Med Biol       Date:  2001-01       Impact factor: 3.609

7.  A new quantum approach to binary classification.

Authors:  Giuseppe Sergioli; Roberto Giuntini; Hector Freytes
Journal:  PLoS One       Date:  2019-05-09       Impact factor: 3.240

8.  OpenCFU, a new free and open-source software to count cell colonies and other circular objects.

Authors:  Quentin Geissmann
Journal:  PLoS One       Date:  2013-02-15       Impact factor: 3.240

9.  Action of x-rays on mammalian cells.

Authors:  T T PUCK; P I MARCUS
Journal:  J Exp Med       Date:  1956-05-01       Impact factor: 14.307

10.  ColonyArea: an ImageJ plugin to automatically quantify colony formation in clonogenic assays.

Authors:  Camilo Guzmán; Manish Bagga; Amanpreet Kaur; Jukka Westermarck; Daniel Abankwa
Journal:  PLoS One       Date:  2014-03-19       Impact factor: 3.240

  10 in total
  2 in total

1.  Leukocyte Segmentation Method Based on Adaptive Retinex Correction and U-Net.

Authors:  Wei Chen; Mengjing Zhu
Journal:  Comput Math Methods Med       Date:  2022-07-04       Impact factor: 2.809

2.  WBC Image Segmentation Based on Residual Networks and Attentional Mechanisms.

Authors:  Jiangping Wu; Xin Zheng; Deyang Liu; Liefu Ai; Pan Tang; Boyang Wang; Yuanzhi Wang
Journal:  Comput Intell Neurosci       Date:  2022-08-31
  2 in total

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