Literature DB >> 33531192

Deep Learning for Imaging and Detection of Microorganisms.

Yang Zhang1, Hao Jiang2, Taoyu Ye2, Mario Juhas3.   

Abstract

Despite tremendous recent interest, the application of deep learning in microbiology has still not reached its full potential. To tackle the challenges faced by human-operated microscopy, deep-learning-based methods have been proposed for microscopic image analysis of a wide range of microorganisms, including viruses, bacteria, fungi, and parasites. We believe that deep-learning technology-based systems will be on the front line of monitoring and investigation of microorganisms.
Copyright © 2021 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  artificial intelligence; classification; deep learning; detection; microscopic imaging; segmentation

Year:  2021        PMID: 33531192     DOI: 10.1016/j.tim.2021.01.006

Source DB:  PubMed          Journal:  Trends Microbiol        ISSN: 0966-842X            Impact factor:   17.079


  8 in total

1.  Self-normalized density map (SNDM) for counting microbiological objects.

Authors:  Krzysztof M Graczyk; Jarosław Pawłowski; Sylwia Majchrowska; Tomasz Golan
Journal:  Sci Rep       Date:  2022-06-22       Impact factor: 4.996

2.  Correction of out-of-focus microscopic images by deep learning.

Authors:  Chi Zhang; Hao Jiang; Weihuang Liu; Junyi Li; Shiming Tang; Mario Juhas; Yang Zhang
Journal:  Comput Struct Biotechnol J       Date:  2022-04-20       Impact factor: 6.155

3.  Identifying the presence of bacteria on digital images by using asymmetric distribution with k-means clustering algorithm.

Authors:  K V Satyanarayana; N Thirupathi Rao; Debnath Bhattacharyya; Yu-Chen Hu
Journal:  Multidimens Syst Signal Process       Date:  2021-10-09       Impact factor: 2.030

4.  A New Few-Shot Learning Method of Bacterial Colony Counting Based on the Edge Computing Device.

Authors:  Beini Zhang; Zhentao Zhou; Wenbin Cao; Xirui Qi; Chen Xu; Weijia Wen
Journal:  Biology (Basel)       Date:  2022-01-19

Review 5.  Deep learning for microscopic examination of protozoan parasites.

Authors:  Chi Zhang; Hao Jiang; Hanlin Jiang; Hui Xi; Baodong Chen; Yubing Liu; Mario Juhas; Junyi Li; Yang Zhang
Journal:  Comput Struct Biotechnol J       Date:  2022-02-11       Impact factor: 7.271

Review 6.  Advancements in Testing Strategies for COVID-19.

Authors:  Rabia Asghar; Madiha Rasheed; Jalees Ul Hassan; Mohsin Rafique; Mashooq Khan; Yulin Deng
Journal:  Biosensors (Basel)       Date:  2022-06-13

7.  YOLO Algorithm for Long-Term Tracking and Detection of Escherichia Coli at Different Depths of Microchannels Based on Microsphere Positioning Assistance.

Authors:  Lesheng Sun; Ying Xu; Zhikang Rao; Juntao Chen; Zhe Liu; Ning Lu
Journal:  Sensors (Basel)       Date:  2022-09-30       Impact factor: 3.847

8.  Generation of microbial colonies dataset with deep learning style transfer.

Authors:  Jarosław Pawłowski; Sylwia Majchrowska; Tomasz Golan
Journal:  Sci Rep       Date:  2022-03-25       Impact factor: 4.379

  8 in total

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