Literature DB >> 33529915

Genetic association analysis of ATG16L1 rs2241880, rs6758317 and ATG16L2 rs11235604 polymorphisms with rheumatoid arthritis in a Chinese population.

Ji-Jun Mo1, Wei Zhang2, Qin-Wen Wen3, Ting-Hui Wang3, Wen Qin3, Zhen Zhang3, Hua Huang3, Han Cen4, Xiu-Di Wu5.   

Abstract

OBJECTIVE: This study was performed to test whether ATG16L1 rs2241880, rs6758317 and ATG16L2 rs11235604 polymorphisms were associated with RA and further examine the genetic interaction between ATG16L1 and ATG16L2 in RA among a Chinese population.
METHODS: A total of 594 RA patients and 604 healthy controls were included, and the genetic polymorphisms were genotyped based on HI-SNP technology.
RESULTS: Significant associations of ATG16L1 rs2241880 polymorphism with RA (T/T versus C/T + C/C, OR = 1.32, 95% CI 1.04-1.67, P = 0.02), cyclic citrullinated peptide (CCP)-positive RA (genotype comparison, P = 5.38 × 10-3; T/T versus C/T + C/C, OR = 1.45, 95% CI 1.12-1.87, P = 4.86 × 10-3) and rheumatoid factor (RF)-positive RA (genotype comparison, P = 0.03; T versus C, OR = 1.23, 95% CI 1.01-1.49, P = 0.04; T/T versus C/T + C/C, OR = 1.44, 95% CI 1.10-1.88, P = 7.62 × 10-3) were found. Significant genetic interaction between ATG16L1 rs2241880 and ATG16L2 rs11235604 was associated RA (P = 0.03), and significant genetic interaction between ATG16L1 rs6758317 and ATG16L2 rs11235604 was associated with RA (P = 7.57 × 10-3), CCP-positive RA (P = 0.01) and RF-positive RA (P = 0.01). Consistently, stratification analysis found that significant associations of RA with ATG16L1 rs2241880, rs6758317 polymorphisms were only detected among individuals carrying C/T genotype of the ATG16L2 rs11235604 polymorphism.
CONCLUSIONS: Our results indicated that ATG16L1 rs2241880 polymorphism was associated with RA in Chinese population, and provided evidence for genetic interaction between ATG16L1 and ATG16L2 in determing the development of RA, highlighting the involvement of autophagy in the pathogenesis of RA.
Copyright © 2021 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  ATG16L1; ATG16L2; Autophagy; Polymorphism; Rheumatoid arthritis

Mesh:

Substances:

Year:  2021        PMID: 33529915     DOI: 10.1016/j.intimp.2021.107378

Source DB:  PubMed          Journal:  Int Immunopharmacol        ISSN: 1567-5769            Impact factor:   4.932


  2 in total

1.  Transcriptome profile of spleen tissues from locally-adapted Kenyan pigs (Sus scrofa) experimentally infected with three varying doses of a highly virulent African swine fever virus genotype IX isolate: Ken12/busia.1 (ken-1033).

Authors:  Eunice Magoma Machuka; John Juma; Anne Wangari Thairu Muigai; Joshua Oluoch Amimo; Roger Pelle; Edward Okoth Abworo
Journal:  BMC Genomics       Date:  2022-07-19       Impact factor: 4.547

2.  Associations between ATG16L1 gene polymorphism and antineutrophil cytoplasmic antibody-associated vasculitis in the Chinese Guangxi population: A case-control study.

Authors:  Bing-Mei Feng; Chao Xue; Hai-Zheng Huang; Yu-Gan Lu; Tao Feng; Xue-Yi Huang; Wei Li
Journal:  J Clin Lab Anal       Date:  2022-08-10       Impact factor: 3.124

  2 in total

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