Literature DB >> 33528817

NeuroKit2: A Python toolbox for neurophysiological signal processing.

Dominique Makowski1, Tam Pham2, Zen J Lau2, Jan C Brammer3, François Lespinasse4,5, Hung Pham6, Christopher Schölzel7, S H Annabel Chen2,8,9.   

Abstract

NeuroKit2 is an open-source, community-driven, and user-centered Python package for neurophysiological signal processing. It provides a comprehensive suite of processing routines for a variety of bodily signals (e.g., ECG, PPG, EDA, EMG, RSP). These processing routines include high-level functions that enable data processing in a few lines of code using validated pipelines, which we illustrate in two examples covering the most typical scenarios, such as an event-related paradigm and an interval-related analysis. The package also includes tools for specific processing steps such as rate extraction and filtering methods, offering a trade-off between high-level convenience and fine-tuned control. Its goal is to improve transparency and reproducibility in neurophysiological research, as well as foster exploration and innovation. Its design philosophy is centred on user-experience and accessibility to both novice and advanced users.

Entities:  

Keywords:  Biosignals; ECG; EDA; EMG; Neurophysiology; Python

Year:  2021        PMID: 33528817     DOI: 10.3758/s13428-020-01516-y

Source DB:  PubMed          Journal:  Behav Res Methods        ISSN: 1554-351X


  1 in total

1.  cvxEDA: A Convex Optimization Approach to Electrodermal Activity Processing.

Authors:  Alberto Greco; Gaetano Valenza; Antonio Lanata; Enzo Pasquale Scilingo; Luca Citi
Journal:  IEEE Trans Biomed Eng       Date:  2015-08-28       Impact factor: 4.538

  1 in total
  33 in total

1.  Pilot Study for Correlation of Heart Rate Variability and Dopamine Transporter Brain Imaging in Patients with Parkinsonian Syndrome.

Authors:  Devdutta S Warhadpande; Jiayan Huo; William A Libling; Carol Stuehm; Bijan Najafi; Scott Sherman; Hong Lei; Janet Meiling Roveda; Phillip H Kuo
Journal:  Sensors (Basel)       Date:  2022-07-05       Impact factor: 3.847

2.  Multiscale entropy analysis of retinal signals reveals reduced complexity in a mouse model of Alzheimer's disease.

Authors:  Joaquín Araya-Arriagada; Sebastián Garay; Cristóbal Rojas; Claudia Duran-Aniotz; Adrián G Palacios; Max Chacón; Leonel E Medina
Journal:  Sci Rep       Date:  2022-05-25       Impact factor: 4.996

3.  Lowering the Sampling Rate: Heart Rate Response during Cognitive Fatigue.

Authors:  Kar Fye Alvin Lee; Elliot Chan; Josip Car; Woon-Seng Gan; Georgios Christopoulos
Journal:  Biosensors (Basel)       Date:  2022-05-10

4.  A Methodology for Evaluating Operator Usage of Machine Learning Recommendations for Power Grid Contingency Analysis.

Authors:  John Wenskovitch; Brett Jefferson; Alexander Anderson; Jessica Baweja; Danielle Ciesielski; Corey Fallon
Journal:  Front Big Data       Date:  2022-06-14

5.  Interpretable Assessment of ST-Segment Deviation in ECG Time Series.

Authors:  Israel Campero Jurado; Andrejs Fedjajevs; Joaquin Vanschoren; Aarnout Brombacher
Journal:  Sensors (Basel)       Date:  2022-06-29       Impact factor: 3.847

6.  Enhancing self-management in type 1 diabetes with wearables and deep learning.

Authors:  Taiyu Zhu; Chukwuma Uduku; Kezhi Li; Pau Herrero; Nick Oliver; Pantelis Georgiou
Journal:  NPJ Digit Med       Date:  2022-06-27

7.  Resting-state heart rate variability (HRV) mediates the association between perceived chronic stress and ambiguity avoidance.

Authors:  Talita Jiryis; Noa Magal; Eyal Fructher; Uri Hertz; Roee Admon
Journal:  Sci Rep       Date:  2022-10-21       Impact factor: 4.996

8.  Estimation of Motion and Respiratory Characteristics during the Meditation Practice Based on Video Analysis.

Authors:  Alexey Kashevnik; Walaa Othman; Igor Ryabchikov; Nikolay Shilov
Journal:  Sensors (Basel)       Date:  2021-05-29       Impact factor: 3.576

9.  CEPS: An Open Access MATLAB Graphical User Interface (GUI) for the Analysis of Complexity and Entropy in Physiological Signals.

Authors:  David Mayor; Deepak Panday; Hari Kala Kandel; Tony Steffert; Duncan Banks
Journal:  Entropy (Basel)       Date:  2021-03-08       Impact factor: 2.524

10.  Preoperative Heart Rate Variability During Sleep Predicts Vagus Nerve Stimulation Outcome Better in Patients With Drug-Resistant Epilepsy.

Authors:  Xi Fang; Hong-Yun Liu; Zhi-Yan Wang; Zhao Yang; Tung-Yang Cheng; Chun-Hua Hu; Hong-Wei Hao; Fan-Gang Meng; Yu-Guang Guan; Yan-Shan Ma; Shu-Li Liang; Jiu-Luan Lin; Ming-Ming Zhao; Lu-Ming Li
Journal:  Front Neurol       Date:  2021-07-07       Impact factor: 4.003

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