Literature DB >> 33527894

A modular approach to integrating multiple data sources into real-time clinical prediction for pediatric diarrhea.

Ben J Brintz1,2, Benjamin Haaland3, Joel Howard4, Dennis L Chao5, Joshua L Proctor5, Ashraful I Khan6, Sharia M Ahmed2, Lindsay T Keegan1, Tom Greene1, Adama Mamby Keita7, Karen L Kotloff8, James A Platts-Mills9, Eric J Nelson10,11, Adam C Levine12, Andrew T Pavia4, Daniel T Leung2,13.   

Abstract

Traditional clinical prediction models focus on parameters of the individual patient. For infectious diseases, sources external to the patient, including characteristics of prior patients and seasonal factors, may improve predictive performance. We describe the development of a predictive model that integrates multiple sources of data in a principled statistical framework using a post-test odds formulation. Our method enables electronic real-time updating and flexibility, such that components can be included or excluded according to data availability. We apply this method to the prediction of etiology of pediatric diarrhea, where 'pre-test' epidemiologic data may be highly informative. Diarrhea has a high burden in low-resource settings, and antibiotics are often over-prescribed. We demonstrate that our integrative method outperforms traditional prediction in accurately identifying cases with a viral etiology, and show that its clinical application, especially when used with an additional diagnostic test, could result in a 61% reduction in inappropriately prescribed antibiotics.
© 2021, Brintz et al.

Entities:  

Keywords:  antibiotic stewardship; clinical decision support; clinical prediction rule; diarrhea; enteric infection; epidemiology; global health; virus

Mesh:

Substances:

Year:  2021        PMID: 33527894      PMCID: PMC7853717          DOI: 10.7554/eLife.63009

Source DB:  PubMed          Journal:  Elife        ISSN: 2050-084X            Impact factor:   8.140


  26 in total

Review 1.  Long-term impacts of antibiotic exposure on the human intestinal microbiota.

Authors:  Cecilia Jernberg; Sonja Löfmark; Charlotta Edlund; Janet K Jansson
Journal:  Microbiology (Reading)       Date:  2010-08-12       Impact factor: 2.777

2.  Global seasonality of rotavirus infections.

Authors:  S M Cook; R I Glass; C W LeBaron; M S Ho
Journal:  Bull World Health Organ       Date:  1990       Impact factor: 9.408

Review 3.  Global climate and infectious disease: the cholera paradigm.

Authors:  R R Colwell
Journal:  Science       Date:  1996-12-20       Impact factor: 47.728

4.  Simple clinical score and laboratory-based method to predict bacterial etiology of acute diarrhea in childhood.

Authors:  M Fontana; G Zuin; S Paccagnini; R Ceriani; S Quaranta; M Villa; N Principi
Journal:  Pediatr Infect Dis J       Date:  1987-12       Impact factor: 2.129

5.  Antibiogram pattern and seasonality of Salmonella serotypes in a North Indian tertiary care hospital.

Authors:  S Mohanty; K Renuka; S Sood; B K DAS; A Kapil
Journal:  Epidemiol Infect       Date:  2006-02-14       Impact factor: 2.451

6.  Antibiotic use in children is associated with increased risk of asthma.

Authors:  Fawziah Marra; Carlo A Marra; Kathryn Richardson; Larry D Lynd; Anita Kozyrskyj; David M Patrick; William R Bowie; J Mark Fitzgerald
Journal:  Pediatrics       Date:  2009-03       Impact factor: 7.124

7.  Clinical predictors for etiology of acute diarrhea in children in resource-limited settings.

Authors:  Ben J Brintz; Joel I Howard; Benjamin Haaland; James A Platts-Mills; Tom Greene; Adam C Levine; Eric J Nelson; Andrew T Pavia; Karen L Kotloff; Daniel T Leung
Journal:  PLoS Negl Trop Dis       Date:  2020-10-09

8.  Seasonality of cholera from 1974 to 2005: a review of global patterns.

Authors:  Michael Emch; Caryl Feldacker; M Sirajul Islam; Mohammad Ali
Journal:  Int J Health Geogr       Date:  2008-06-20       Impact factor: 3.918

9.  Using electronic health record data to develop inpatient mortality predictive model: Acute Laboratory Risk of Mortality Score (ALaRMS).

Authors:  Ying P Tabak; Xiaowu Sun; Carlos M Nunez; Richard S Johannes
Journal:  J Am Med Inform Assoc       Date:  2013-10-04       Impact factor: 4.497

Review 10.  The Microbiome and Mental Health: Looking Back, Moving Forward with Lessons from Allergic Diseases.

Authors:  Alan C Logan; Felice N Jacka; Jeffrey M Craig; Susan L Prescott
Journal:  Clin Psychopharmacol Neurosci       Date:  2016-05-31       Impact factor: 2.582

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  1 in total

1.  External validation of a mobile clinical decision support system for diarrhea etiology prediction in children: A multicenter study in Bangladesh and Mali.

Authors:  Stephanie Chow Garbern; Eric J Nelson; Sabiha Nasrin; Adama Mamby Keita; Ben J Brintz; Monique Gainey; Henry Badji; Dilruba Nasrin; Joel Howard; Mami Taniuchi; James A Platts-Mills; Karen L Kotloff; Rashidul Haque; Adam C Levine; Samba O Sow; Nur Haque Alam; Daniel T Leung
Journal:  Elife       Date:  2022-02-09       Impact factor: 8.140

  1 in total

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