Literature DB >> 33527034

Transcriptional E2F1/2/3/6 as potential prognostic biomarkers in cutaneous melanoma.

Jing Li1, Xiao-Lei Shu2, Qing Shao2, Qian Luo2, Qing-Chun Diao1, Xin Zhang2, Jiang-Dong Sui2, Jing Guo2, Dan Tao2, Xian Zhou2, Ying Wang2, Can Wang2.   

Abstract

Although the abnormal expression of members of the E2F family has been reported to participate in carcinogenesis in many human types of cancer, the bioinformatics role of the E2F family in melanoma is unknown. This research was designed to detect the expression, methylation, prognostic value and potential effects of the E2F family in melanoma. We investigated E2F family mRNA expression from the Oncomine and GEPIA databases and their methylation status in the MethHC database. Meanwhile, we detected the relative E2F family expression levels by qPCR and immunohistochemistry. Kaplan-Meier Plotter was used to draw survival analysis charts, and gene functional enrichment analyses were applied through cBioPortal database analysis. E2F1/2/3/4/5/6 mRNA and proteins were clearly upregulated in cutaneous melanoma patients, and high expression levels of E2F1/2/3/6 were statistically related to high methylation levels. Increased mRNA expression of E2F1/2/3/6 was related to lower overall survival rates (OS) and disease-free survival (DFS) in cutaneous melanoma cases. Meanwhile, E2F1/2/3/6 carried out these effects through regulating multiple signaling pathways, including the MAPK, PI3K-Akt and p53 signaling pathways. Taking together, our findings suggest that E2F1/2/3/6 could act as potential targets for precision therapy in cutaneous melanoma patients. AJTR
Copyright © 2021.

Entities:  

Keywords:  E2F1/2/3/6; bioinformatics analysis; cutaneous melanoma; database mining; prognostic value

Year:  2021        PMID: 33527034      PMCID: PMC7847504     

Source DB:  PubMed          Journal:  Am J Transl Res        ISSN: 1943-8141            Impact factor:   4.060


  54 in total

Review 1.  Gene silencing in cancer in association with promoter hypermethylation.

Authors:  James G Herman; Stephen B Baylin
Journal:  N Engl J Med       Date:  2003-11-20       Impact factor: 91.245

2.  Novel genes associated with malignant melanoma but not benign melanocytic lesions.

Authors:  Dmitri Talantov; Abhijit Mazumder; Jack X Yu; Thomas Briggs; Yuqiu Jiang; John Backus; David Atkins; Yixin Wang
Journal:  Clin Cancer Res       Date:  2005-10-15       Impact factor: 12.531

3.  Structural Conservation and E2F Binding Specificity within the Retinoblastoma Pocket Protein Family.

Authors:  Tyler J Liban; Michael J Thwaites; Frederick A Dick; Seth M Rubin
Journal:  J Mol Biol       Date:  2016-08-25       Impact factor: 5.469

4.  Midkine and syndecan‑1 levels correlate with the progression of malignant gastric cardiac adenocarcinoma.

Authors:  Xiu-Feng Hu; Jun Yao; She-Gan Gao; Yan-Tong Yang; Xiu-Qing Peng; Xiao-Shan Feng
Journal:  Mol Med Rep       Date:  2014-07-09       Impact factor: 2.952

5.  A systematic comparison and evaluation of high density exon arrays and RNA-seq technology used to unravel the peripheral blood transcriptome of sickle cell disease.

Authors:  Nalini Raghavachari; Jennifer Barb; Yanqin Yang; Poching Liu; Kimberly Woodhouse; Daniel Levy; Christopher J O'Donnell; Peter J Munson; Gregory J Kato
Journal:  BMC Med Genomics       Date:  2012-06-29       Impact factor: 3.063

6.  MethHC: a database of DNA methylation and gene expression in human cancer.

Authors:  Wei-Yun Huang; Sheng-Da Hsu; Hsi-Yuan Huang; Yi-Ming Sun; Chih-Hung Chou; Shun-Long Weng; Hsien-Da Huang
Journal:  Nucleic Acids Res       Date:  2014-11-14       Impact factor: 16.971

7.  E2F4 regulatory program predicts patient survival prognosis in breast cancer.

Authors:  Sari S Khaleel; Erik H Andrews; Matthew Ung; James DiRenzo; Chao Cheng
Journal:  Breast Cancer Res       Date:  2014-12-02       Impact factor: 6.466

8.  The role of Wnt/β-catenin signaling pathway in melanoma epithelial-to-mesenchymal-like switching: evidences from patients-derived cell lines.

Authors:  Daniela Kovacs; Emilia Migliano; Luca Muscardin; Vitaliano Silipo; Caterina Catricalà; Mauro Picardo; Barbara Bellei
Journal:  Oncotarget       Date:  2016-07-12

9.  E2F3 promotes cancer growth and is overexpressed through copy number variation in human melanoma.

Authors:  Zhicai Feng; Cheng Peng; Daojiang Li; Danhua Zhang; Xu Li; Fengran Cui; Yanhong Chen; Quanyong He
Journal:  Onco Targets Ther       Date:  2018-08-30       Impact factor: 4.147

10.  Carcinogenesis effects of E2F transcription factor 8 (E2F8) in hepatocellular carcinoma outcomes: an integrated bioinformatic report.

Authors:  Ying Lü; Jing Zhang; Lei Li; Shun Li; Zongguo Yang
Journal:  Biosci Rep       Date:  2020-02-28       Impact factor: 3.840

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  1 in total

1.  Dexamethasone Promotes a Stem-Like Phenotype in Human Melanoma Cells via Tryptophan 2,3 Dioxygenase.

Authors:  Marta Cecchi; Antonella Mannini; Andrea Lapucci; Angela Silvano; Matteo Lulli; Cristina Luceri; Mario D'Ambrosio; Alberto Chiarugi; Ali H Eid; Astrid Parenti
Journal:  Front Pharmacol       Date:  2022-06-30       Impact factor: 5.988

  1 in total

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