Literature DB >> 33526894

Efficient Lewis acid catalysis of an abiological reaction in a de novo protein scaffold.

Sophie Basler1, Sabine Studer1, Yike Zou2, Takahiro Mori1, Yusuke Ota1, Anna Camus1, H Adrian Bunzel1, Roger C Helgeson2, K N Houk2, Gonzalo Jiménez-Osés3,4, Donald Hilvert5.   

Abstract

New enzyme catalysts are usually engineered by repurposing the active sites of natural proteins. Here we show that design and directed evolution can be used to transform a non-natural, functionally naive zinc-binding protein into a highly active catalyst for an abiological hetero-Diels-Alder reaction. The artificial metalloenzyme achieves >104 turnovers per active site, exerts absolute control over reaction pathway and product stereochemistry, and displays a catalytic proficiency (1/KTS = 2.9 × 1010 M-1) that exceeds all previously characterized Diels-Alderases. These properties capitalize on effective Lewis acid catalysis, a chemical strategy for accelerating Diels-Alder reactions common in the laboratory but so far unknown in nature. Extension of this approach to other metal ions and other de novo scaffolds may propel the design field in exciting new directions.

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Year:  2021        PMID: 33526894     DOI: 10.1038/s41557-020-00628-4

Source DB:  PubMed          Journal:  Nat Chem        ISSN: 1755-4330            Impact factor:   24.427


  5 in total

1.  De novo metalloprotein design.

Authors:  Matthew J Chalkley; Samuel I Mann; William F DeGrado
Journal:  Nat Rev Chem       Date:  2021-12-06       Impact factor: 34.571

Review 2.  Protein Assembly by Design.

Authors:  Jie Zhu; Nicole Avakyan; Albert Kakkis; Alexander M Hoffnagle; Kenneth Han; Yiying Li; Zhiyin Zhang; Tae Su Choi; Youjeong Na; Chung-Jui Yu; F Akif Tezcan
Journal:  Chem Rev       Date:  2021-08-18       Impact factor: 72.087

Review 3.  The road to fully programmable protein catalysis.

Authors:  Sarah L Lovelock; Rebecca Crawshaw; Sophie Basler; Colin Levy; David Baker; Donald Hilvert; Anthony P Green
Journal:  Nature       Date:  2022-06-01       Impact factor: 69.504

4.  Mechanism of the Stereoselective Catalysis of Diels-Alderase PyrE3 Involved in Pyrroindomycin Biosynthesis.

Authors:  Bo Li; Xingyi Guan; Song Yang; Yike Zou; Wen Liu; K N Houk
Journal:  J Am Chem Soc       Date:  2022-03-08       Impact factor: 16.383

5.  Unravelling the Structure of the Tetrahedral Metal-Binding Site in METP3 through an Experimental and Computational Approach.

Authors:  Salvatore La Gatta; Linda Leone; Ornella Maglio; Maria De Fenza; Flavia Nastri; Vincenzo Pavone; Marco Chino; Angela Lombardi
Journal:  Molecules       Date:  2021-08-28       Impact factor: 4.411

  5 in total

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