Literature DB >> 33526340

Connecting the Dots: Linking Caenorhabditis elegans Small RNA Pathways and Germ Granules.

Adam E Sundby1, Ruxandra I Molnar1, Julie M Claycomb2.   

Abstract

Germ granules are non-membrane bound, phase-separated organelles, composed of RNAs and proteins. Germ granules are present only within the germ cells of animals, including model systems such as Caenorhabditis elegans, Drosophila, mice, and zebrafish, where they play critical roles in specifying the germ lineage, the inheritance of epigenetic information, and post-transcriptional gene regulation. Across species, conserved germ granule proteins reflect these essential functions. A significant proportion of proteins that localize to germ granules are components of RNA metabolism and small RNA (sRNA) gene regulatory pathways. Here we synthesize our current knowledge of the roles that germ granules and their components play in sRNA pathway functions, transgenerational inheritance, and fertility in the C. elegans germline.
Copyright © 2021 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  C. elegans; RNAi; epigenetic inheritance; germ granules; germline; small RNA

Mesh:

Substances:

Year:  2021        PMID: 33526340     DOI: 10.1016/j.tcb.2020.12.012

Source DB:  PubMed          Journal:  Trends Cell Biol        ISSN: 0962-8924            Impact factor:   20.808


  8 in total

1.  The Caenorhabditis elegans TDRD5/7-like protein, LOTR-1, interacts with the helicase ZNFX-1 to balance epigenetic signals in the germline.

Authors:  Elisabeth A Marnik; Miguel V Almeida; P Giselle Cipriani; George Chung; Edoardo Caspani; Emil Karaulanov; Hin Hark Gan; John Zinno; Ida J Isolehto; Fridolin Kielisch; Falk Butter; Catherine S Sharp; Roisin M Flanagan; Frederic X Bonnet; Fabio Piano; René F Ketting; Kristin C Gunsalus; Dustin L Updike
Journal:  PLoS Genet       Date:  2022-06-03       Impact factor: 6.020

2.  Isolation, profiling, and tracking of extracellular vesicle cargo in Caenorhabditis elegans.

Authors:  Inna A Nikonorova; Juan Wang; Alexander L Cope; Peter E Tilton; Kaiden M Power; Jonathon D Walsh; Jyothi S Akella; Amber R Krauchunas; Premal Shah; Maureen M Barr
Journal:  Curr Biol       Date:  2022-03-24       Impact factor: 10.900

3.  SIMR foci are found in the progenitor germ cells of C. elegans embryos.

Authors:  Celja J Uebel; Kevin I Manage; Carolyn M Phillips
Journal:  MicroPubl Biol       Date:  2021-02-22

Review 4.  Nuage condensates: accelerators or circuit breakers for sRNA silencing pathways?

Authors:  John Paul Tsu Ouyang; Geraldine Seydoux
Journal:  RNA       Date:  2021-11-12       Impact factor: 5.636

5.  Small RNA pathways in the nematode Ascaris in the absence of piRNAs.

Authors:  Maxim V Zagoskin; Jianbin Wang; Ashley T Neff; Giovana M B Veronezi; Richard E Davis
Journal:  Nat Commun       Date:  2022-02-11       Impact factor: 14.919

6.  Large RNP granules in Caenorhabditis elegans oocytes have distinct phases of RNA-binding proteins.

Authors:  Mohamed T Elaswad; Brooklynne M Watkins; Katherine G Sharp; Chloe Munderloh; Jennifer A Schisa
Journal:  G3 (Bethesda)       Date:  2022-08-25       Impact factor: 3.542

7.  Transgenerational effects of alcohol on behavioral sensitivity to alcohol in Caenorhabditis elegans.

Authors:  Dawn M Guzman; Keerthana Chakka; Ted Shi; Alyssa Marron; Ansley E Fiorito; Nima S Rahman; Stephanie Ro; Dylan G Sucich; Jonathan T Pierce
Journal:  PLoS One       Date:  2022-10-18       Impact factor: 3.752

8.  Two isoforms of the essential C. elegans Argonaute CSR-1 differentially regulate sperm and oocyte fertility.

Authors:  Amanda G Charlesworth; Uri Seroussi; Nicolas J Lehrbach; Mathias S Renaud; Adam E Sundby; Ruxandra I Molnar; Robert X Lao; Alexandra R Willis; Jenna R Woock; Matthew J Aber; Annette J Diao; Aaron W Reinke; Gary Ruvkun; Julie M Claycomb
Journal:  Nucleic Acids Res       Date:  2021-09-07       Impact factor: 16.971

  8 in total

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