Literature DB >> 33525474

A Transcriptomic Approach Provides Insights on the Mycorrhizal Symbiosis of the Mediterranean Orchid Limodorum abortivum in Nature.

Rafael B S Valadares1, Fabio Marroni2,3, Fabiano Sillo4, Renato R M Oliveira1,5, Raffaella Balestrini4, Silvia Perotto6.   

Abstract

The study of orchid mycorrhizal interactions is particularly complex because of the peculiar life cycle of these plants and their diverse trophic strategies. Here, transcriptomics has been applied to investigate gene expression in the mycorrhizal roots of Limodorum abortivum, a terrestrial mixotrophic orchid that associates with ectomycorrhizal fungi in the genus Russula. Our results provide new insights into the mechanisms underlying plant-fungus interactions in adult orchids in nature and in particular into the plant responses to the mycorrhizal symbiont(s) in the roots of mixotrophic orchids. Our results indicate that amino acids may represent the main nitrogen source in mycorrhizal roots of L. abortivum, as already suggested for orchid protocorms and other orchid species. The upregulation, in mycorrhizal L. abortivum roots, of some symbiotic molecular marker genes identified in mycorrhizal roots from other orchids as well as in arbuscular mycorrhiza, may mirror a common core of plant genes involved in endomycorrhizal symbioses. Further efforts will be required to understand whether the specificities of orchid mycorrhiza depend on fine-tuned regulation of these common components, or whether specific additional genes are involved.

Entities:  

Keywords:  CAZymes; nitrogen metabolism; orchid mycorrhiza; transcriptomics

Year:  2021        PMID: 33525474      PMCID: PMC7911150          DOI: 10.3390/plants10020251

Source DB:  PubMed          Journal:  Plants (Basel)        ISSN: 2223-7747


  61 in total

1.  Basic local alignment search tool.

Authors:  S F Altschul; W Gish; W Miller; E W Myers; D J Lipman
Journal:  J Mol Biol       Date:  1990-10-05       Impact factor: 5.469

2.  Genome-wide reprogramming of regulatory networks, transport, cell wall and membrane biogenesis during arbuscular mycorrhizal symbiosis in Lotus japonicus.

Authors:  Mike Guether; Raffaella Balestrini; Matthew Hannah; Ji He; Michael K Udvardi; Paola Bonfante
Journal:  New Phytol       Date:  2009-01-13       Impact factor: 10.151

3.  Age-dependent mycorrhizal specificity in an invasive orchid, Oeceoclades maculata.

Authors:  Paul Bayman; Ana T Mosquera-Espinosa; Carla M Saladini-Aponte; Nilbeth C Hurtado-Guevara; Naida L Viera-Ruiz
Journal:  Am J Bot       Date:  2016-10-26       Impact factor: 3.844

4.  A mitochondrial GABA permease connects the GABA shunt and the TCA cycle, and is essential for normal carbon metabolism.

Authors:  Simon Michaeli; Aaron Fait; Kelly Lagor; Adriano Nunes-Nesi; Nicole Grillich; Ayelet Yellin; Dana Bar; Munziba Khan; Alisdair R Fernie; Frank J Turano; Hillel Fromm
Journal:  Plant J       Date:  2011-05-31       Impact factor: 6.417

Review 5.  The importance of cytosolic glutamine synthetase in nitrogen assimilation and recycling.

Authors:  Stéphanie M Bernard; Dimah Z Habash
Journal:  New Phytol       Date:  2009       Impact factor: 10.151

6.  A subtilisin-like serine protease essential for mucilage release from Arabidopsis seed coats.

Authors:  Carsten Rautengarten; Björn Usadel; Lutz Neumetzler; Jürgen Hartmann; Dirk Büssis; Thomas Altmann
Journal:  Plant J       Date:  2008-02-07       Impact factor: 6.417

7.  HTSeq--a Python framework to work with high-throughput sequencing data.

Authors:  Simon Anders; Paul Theodor Pyl; Wolfgang Huber
Journal:  Bioinformatics       Date:  2014-09-25       Impact factor: 6.937

8.  Molecular evidence for origin, diversification and ancient gene duplication of plant subtilases (SBTs).

Authors:  Yan Xu; Sibo Wang; Linzhou Li; Sunil Kumar Sahu; Morten Petersen; Xin Liu; Michael Melkonian; Gengyun Zhang; Huan Liu
Journal:  Sci Rep       Date:  2019-08-28       Impact factor: 4.379

9.  SNARE Complexity in Arbuscular Mycorrhizal Symbiosis.

Authors:  Rik Huisman; Jan Hontelez; Ton Bisseling; Erik Limpens
Journal:  Front Plant Sci       Date:  2020-04-03       Impact factor: 5.753

10.  Kraken: ultrafast metagenomic sequence classification using exact alignments.

Authors:  Derrick E Wood; Steven L Salzberg
Journal:  Genome Biol       Date:  2014-03-03       Impact factor: 13.583

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  4 in total

1.  Orchid Phylotranscriptomics: The Prospects of Repurposing Multi-Tissue Transcriptomes for Phylogenetic Analysis and Beyond.

Authors:  Darren C J Wong; Rod Peakall
Journal:  Front Plant Sci       Date:  2022-05-27       Impact factor: 6.627

2.  Comparative Transcriptomics Analysis of the Symbiotic Germination of D. officinale (Orchidaceae) With Emphasis on Plant Cell Wall Modification and Cell Wall-Degrading Enzymes.

Authors:  Juan Chen; Yanjing Tang; Annegret Kohler; Annie Lebreton; Yongmei Xing; Dongyu Zhou; Yang Li; Francis M Martin; Shunxing Guo
Journal:  Front Plant Sci       Date:  2022-05-06       Impact factor: 5.753

Review 3.  The Roles of Phosphorus and Nitrogen Nutrient Transporters in the Arbuscular Mycorrhizal Symbiosis.

Authors:  Wenjing Rui; Zhipeng Mao; Zhifang Li
Journal:  Int J Mol Sci       Date:  2022-09-20       Impact factor: 6.208

4.  Integrative Study Supports the Role of Trehalose in Carbon Transfer From Fungi to Mycotrophic Orchid.

Authors:  Jan Ponert; Jan Šoch; Stanislav Vosolsobě; Klára Čiháková; Helena Lipavská
Journal:  Front Plant Sci       Date:  2021-12-09       Impact factor: 5.753

  4 in total

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