Literature DB >> 33521166

The Microbial Flora in an Experimental Polymicrobial Abdominal Sepsis Model Probed by 16S rRNA Sequencing.

Miho Shibamura-Fujiogi1,2, Sophia Koutsogiannaki1,2, Lifei Hou1,2, Koichi Yuki1,2.   

Abstract

BACKGROUND: Cecal ligation and puncture (CLP) surgery is a widely used preclinical model to induce and study sepsis because it is considered to recapitulate the course of human sepsis the most. This model is highly dependent on the polymicrobial gut flora and represents polymicrobial abdominal sepsis. While the majority of studies using CLP model have focused on the delineation of host immune responses, a limited number of reports have described the composition of microbial strains in this model, although microbial composition can significantly affect the outcome of sepsis in general.
METHODS: CLP surgery was performed in mice on C57BL6/J from the Jackson laboratory. We examined the composition of microbes at the peritoneal cavity using 16S rRNA sequencing after CLP surgery at 12 and 24 hours. Baseline cecal microbial flora was also analyzed.
RESULTS: The bacteria strains from the initial cecum flora consisted of mixed aerobic and anaerobic flora. There was a significant change of bacteria flora from the peritoneal cavity between 12 and 24 hours following CLP surgery. Particularly a significantly increased proportion of anaerobic microbes were noted at 24 hours after CLP surgery. We also tested bacterial composition of cecal flora of mice on the same background from the same vendor 6 months later. Baseline cecal microbial flora was different from earlier mice, showing that baseline cecal flora could be different depending on the batch of mice.
CONCLUSION: There was a dynamical chance of peritoneal microbes during CLP sepsis. Potential difference in baseline cecal flora should be kept in mind upon CLP surgery even when using mice from the same vendor.

Entities:  

Keywords:  16S rRNA sequencing; Cecal ligation and puncture; Sepsis

Year:  2020        PMID: 33521166      PMCID: PMC7840154     

Source DB:  PubMed          Journal:  Transl Perioper Pain Med


  17 in total

1.  Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB.

Authors:  T Z DeSantis; P Hugenholtz; N Larsen; M Rojas; E L Brodie; K Keller; T Huber; D Dalevi; P Hu; G L Andersen
Journal:  Appl Environ Microbiol       Date:  2006-07       Impact factor: 4.792

2.  From the Cover: Prolonged Exposure to Volatile Anesthetic Isoflurane Worsens the Outcome of Polymicrobial Abdominal Sepsis.

Authors:  Sophia Koutsogiannaki; Matthew M Schaefers; Toshiaki Okuno; Mai Ohba; Takehiko Yokomizo; Gregory P Priebe; James A DiNardo; Soriano G Sulpicio; Koichi Yuki
Journal:  Toxicol Sci       Date:  2017-04-01       Impact factor: 4.849

Review 3.  The biogeography of polymicrobial infection.

Authors:  Apollo Stacy; Luke McNally; Sophie E Darch; Sam P Brown; Marvin Whiteley
Journal:  Nat Rev Microbiol       Date:  2015-12-30       Impact factor: 60.633

4.  The gut microbiome alters immunophenotype and survival from sepsis.

Authors:  Mandy L Ford; Craig M Coopersmith; Katherine T Fay; Nathan J Klingensmith; Ching-Wen Chen; Wenxiao Zhang; Yini Sun; Kristen N Morrow; Zhe Liang; Eileen M Burd
Journal:  FASEB J       Date:  2019-07-15       Impact factor: 5.191

5.  Mortality and bacteriology of sepsis following cecal ligation and puncture in aged mice.

Authors:  S R Hyde; R D Stith; R E McCallum
Journal:  Infect Immun       Date:  1990-03       Impact factor: 3.441

6.  A new cecal slurry preparation protocol with improved long-term reproducibility for animal models of sepsis.

Authors:  Marlene E Starr; Allison M Steele; Mizuki Saito; Bill J Hacker; B Mark Evers; Hiroshi Saito
Journal:  PLoS One       Date:  2014-12-22       Impact factor: 3.240

7.  Mortality risk factor analysis in colonic perforation: would retroperitoneal contamination increase mortality in colonic perforation?

Authors:  Ri Na Yoo; Bong-Hyeon Kye; Gun Kim; Hyung Jin Kim; Hyeon-Min Cho
Journal:  Ann Surg Treat Res       Date:  2017-09-28       Impact factor: 1.859

8.  Influence of fecal collection conditions and 16S rRNA gene sequencing at two centers on human gut microbiota analysis.

Authors:  Jocelyn Sietsma Penington; Megan A S Penno; Katrina M Ngui; Nadim J Ajami; Alexandra J Roth-Schulze; Stephen A Wilcox; Esther Bandala-Sanchez; John M Wentworth; Simon C Barry; Cheryl Y Brown; Jennifer J Couper; Joseph F Petrosino; Anthony T Papenfuss; Leonard C Harrison
Journal:  Sci Rep       Date:  2018-03-12       Impact factor: 4.379

9.  Chapter 12: Human microbiome analysis.

Authors:  Xochitl C Morgan; Curtis Huttenhower
Journal:  PLoS Comput Biol       Date:  2012-12-27       Impact factor: 4.475

10.  Volatile anesthetics isoflurane and sevoflurane directly target and attenuate Toll-like receptor 4 system.

Authors:  Toshiaki Okuno; Sophia Koutsogiannaki; Lifei Hou; Weiming Bu; Umeharu Ohto; Roderic G Eckenhoff; Takehiko Yokomizo; Koichi Yuki
Journal:  FASEB J       Date:  2019-11-02       Impact factor: 5.834

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.