Literature DB >> 33519753

Gemmatimonas groenlandica sp. nov. Is an Aerobic Anoxygenic Phototroph in the Phylum Gemmatimonadetes.

Yonghui Zeng1,2, Naicheng Wu3, Anne Mette Madsen4, Xihan Chen5, Alastair T Gardiner6, Michal Koblížek6.   

Abstract

The bacterial phylum Gemmatimonadetes contains members capable of performing bacteriochlorophyll-based phototrophy (chlorophototrophy). However, only one strain of chlorophototrophic Gemmatimonadetes bacteria (CGB) has been isolated to date, hampering our further understanding of their photoheterotrophic lifestyle and the evolution of phototrophy in CGB. By combining a culturomics strategy with a rapid screening technique for chlorophototrophs, we report the isolation of a new member of CGB, Gemmatimonas (G.) groenlandica sp. nov., from the surface water of a stream in the Zackenberg Valley in High Arctic Greenland. Distinct from the microaerophilic G. phototrophica strain AP64T, G. groenlandica strain TET16T is a strictly aerobic anoxygenic phototroph, lacking many oxygen-independent enzymes while possessing an expanded arsenal for coping with oxidative stresses. Its pigment composition and infra-red absorption properties are also different from G. phototrophica, indicating that it possesses a different photosystem apparatus. The complete genome sequence of G. groenlandica reveals unique and conserved features in the photosynthesis gene clusters of CGB. We further analyzed metagenome-assembled genomes of CGB obtained from soil and glacier metagenomes from Northeast Greenland, revealing a wide distribution pattern of CGB beyond the stream water investigated.
Copyright © 2021 Zeng, Nupur, Wu, Madsen, Chen, Gardiner and Koblížek.

Entities:  

Keywords:  Gemmatimonadetes; MALDI-TOF MS; bacterial isolation; oligotrophic environment; phototrophy

Year:  2021        PMID: 33519753      PMCID: PMC7844134          DOI: 10.3389/fmicb.2020.606612

Source DB:  PubMed          Journal:  Front Microbiol        ISSN: 1664-302X            Impact factor:   5.640


  10 in total

1.  Taxonomic Structure of Rhizosphere Bacterial Communities and Its Association With the Accumulation of Alkaloidal Metabolites in Sophora flavescens.

Authors:  Jie Chen; Na Li; Jiayu Chang; Kaida Ren; Jiangtao Zhou; Guan'e Yang
Journal:  Front Microbiol       Date:  2021-12-14       Impact factor: 5.640

2.  2.4-Å structure of the double-ring Gemmatimonas phototrophica photosystem.

Authors:  Pu Qian; Alastair T Gardiner; Ivana Šímová; Katerina Naydenova; Tristan I Croll; Philip J Jackson; Miroslav Kloz; Petra Čubáková; Marek Kuzma; Yonghui Zeng; Pablo Castro-Hartmann; Bart van Knippenberg; Kenneth N Goldie; David Kaftan; Pavel Hrouzek; Jan Hájek; Jon Agirre; C Alistair Siebert; David Bína; Kasim Sader; Henning Stahlberg; Roman Sobotka; Christopher J Russo; Tomáš Polívka; C Neil Hunter; Michal Koblížek
Journal:  Sci Adv       Date:  2022-02-16       Impact factor: 14.136

3.  Overfertilization reduces tomato yield under long-term continuous cropping system via regulation of soil microbial community composition.

Authors:  Qiaobo Song; Hongdan Fu; Qingwen Shi; Xuan Shan; Zhen Wang; Zhouping Sun; Tianlai Li
Journal:  Front Microbiol       Date:  2022-08-04       Impact factor: 6.064

4.  (Meta)Genomic Analysis Reveals Diverse Energy Conservation Strategies Employed by Globally Distributed Gemmatimonadota.

Authors:  Xiaowei Zheng; Xin Dai; Yaxin Zhu; Jian Yang; Hongchen Jiang; Hailiang Dong; Li Huang
Journal:  mSystems       Date:  2022-08-01       Impact factor: 7.324

5.  N2O Reduction by Gemmatimonas aurantiaca and Potential Involvement of Gemmatimonadetes Bacteria in N2O Reduction in Agricultural Soils.

Authors:  Mamoru Oshiki; Yuka Toyama; Toshikazu Suenaga; Akihiko Terada; Yasuhiro Kasahara; Takashi Yamaguchi; Nobuo Araki
Journal:  Microbes Environ       Date:  2022       Impact factor: 2.596

6.  Effects of different rotation cropping systems on potato yield, rhizosphere microbial community and soil biochemical properties.

Authors:  Junhong Qin; Chunsong Bian; Shaoguang Duan; Wanxing Wang; Guangcun Li; Liping Jin
Journal:  Front Plant Sci       Date:  2022-09-29       Impact factor: 6.627

7.  Long-term excessive application of K2SO4 fertilizer alters bacterial community and functional pathway of tobacco-planting soil.

Authors:  Ya Lu; Ping Cong; Shuai Kuang; Lina Tang; Yuyi Li; Jianxin Dong; Wenjing Song
Journal:  Front Plant Sci       Date:  2022-09-28       Impact factor: 6.627

8.  Atmospheric chemosynthesis is phylogenetically and geographically widespread and contributes significantly to carbon fixation throughout cold deserts.

Authors:  Angelique E Ray; Julian Zaugg; Nicole Benaud; Devan S Chelliah; Sean Bay; Hon Lun Wong; Pok Man Leung; Mukan Ji; Aleks Terauds; Kate Montgomery; Chris Greening; Don A Cowan; Weidong Kong; Timothy J Williams; Philip Hugenholtz; Belinda C Ferrari
Journal:  ISME J       Date:  2022-08-06       Impact factor: 11.217

9.  Soil microbial diversity and functional capacity associated with the production of edible mushroom Stropharia rugosoannulata in croplands.

Authors:  Shaojun Tang; Tingting Fan; Lei Jin; Pin Lei; Chenxia Shao; Shenlian Wu; Yi Yang; Yuelin He; Rui Ren; Jun Xu
Journal:  PeerJ       Date:  2022-10-03       Impact factor: 3.061

Review 10.  Phylum Gemmatimonadota and Its Role in the Environment.

Authors:  Izabela Mujakić; Kasia Piwosz; Michal Koblížek
Journal:  Microorganisms       Date:  2022-01-12
  10 in total

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