Literature DB >> 33515902

Manifold learning based data-driven modeling for soft biological tissues.

Qizhi He1, Devin W Laurence2, Chung-Hao Lee3, Jiun-Shyan Chen4.   

Abstract

Data-driven modeling directly utilizes experimental data with machine learning techniques to predict a material's response without the necessity of using phenomenological constitutive models. Although data-driven modeling presents a promising new approach, it has yet to be extended to the modeling of large-deformation biological tissues. Herein, we extend our recent local convexity data-driven (LCDD) framework (He and Chen, 2020) to model the mechanical response of a porcine heart mitral valve posterior leaflet. The predictability of the LCDD framework by using various combinations of biaxial and pure shear training protocols are investigated, and its effectiveness is compared with a full structural, phenomenological model modified from Zhang et al. (2016) and a continuum phenomenological Fung-type model (Tong and Fung, 1976). We show that the predictivity of the proposed LCDD nonlinear solver is generally less sensitive to the type of loading protocols (biaxial and pure shear) used in the data set, while more sensitive to the insufficient coverage of the experimental data when compared to the predictivity of the two selected phenomenological models. While no pre-defined functional form in the material model is necessary in LCDD, this study reinstates the importance of having sufficiently rich data coverage in the date-driven and machine learning type of approaches. It is also shown that the proposed LCDD method is an enhancement over the earlier distance-minimization data-driven (DMDD) against noisy data. This study demonstrates that when sufficient data is available, data-driven computing can be an alternative method for modeling complex biological materials.
Copyright © 2020 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Data-driven material modeling; Hyperelasticity; Local convexity data-driven method; Manifold learning; Mitral heart valve

Mesh:

Year:  2020        PMID: 33515902      PMCID: PMC8101698          DOI: 10.1016/j.jbiomech.2020.110124

Source DB:  PubMed          Journal:  J Biomech        ISSN: 0021-9290            Impact factor:   2.712


  19 in total

1.  Biaxial mechanical response of bioprosthetic heart valve biomaterials to high in-plane shear.

Authors:  Wei Sun; Michael S Sacks; Tiffany L Sellaro; William S Slaughter; Michael J Scott
Journal:  J Biomech Eng       Date:  2003-06       Impact factor: 2.097

2.  In vitro dynamic strain behavior of the mitral valve posterior leaflet.

Authors:  Zhaoming He; Jennifer Ritchie; Jonathan S Grashow; Michael S Sacks; Ajit P Yoganathan
Journal:  J Biomech Eng       Date:  2005-06       Impact factor: 2.097

3.  A constitutive law for mitral valve tissue.

Authors:  K May-Newman; F C Yin
Journal:  J Biomech Eng       Date:  1998-02       Impact factor: 2.097

4.  The stress-strain relationship for the skin.

Authors:  P Tong; Y C Fung
Journal:  J Biomech       Date:  1976       Impact factor: 2.712

5.  On the in vivo function of the mitral heart valve leaflet: insights into tissue-interstitial cell biomechanical coupling.

Authors:  Chung-Hao Lee; Will Zhang; Kristen Feaver; Robert C Gorman; Joseph H Gorman; Michael S Sacks
Journal:  Biomech Model Mechanobiol       Date:  2017-04-20

6.  Planar biaxial testing of heart valve cusp replacement biomaterials: Experiments, theory and material constants.

Authors:  Michel R Labrosse; Reza Jafar; Janet Ngu; Munir Boodhwani
Journal:  Acta Biomater       Date:  2016-08-26       Impact factor: 8.947

7.  A meso-scale layer-specific structural constitutive model of the mitral heart valve leaflets.

Authors:  Will Zhang; Salma Ayoub; Jun Liao; Michael S Sacks
Journal:  Acta Biomater       Date:  2015-12-19       Impact factor: 8.947

8.  Simulation of planar soft tissues using a structural constitutive model: Finite element implementation and validation.

Authors:  Rong Fan; Michael S Sacks
Journal:  J Biomech       Date:  2014-03-21       Impact factor: 2.712

Review 9.  How to characterize a nonlinear elastic material? A review on nonlinear constitutive parameters in isotropic finite elasticity.

Authors:  L Angela Mihai; Alain Goriely
Journal:  Proc Math Phys Eng Sci       Date:  2017-11-29       Impact factor: 2.704

10.  An investigation of the anisotropic mechanical properties and anatomical structure of porcine atrioventricular heart valves.

Authors:  Samuel Jett; Devin Laurence; Robert Kunkel; Anju R Babu; Katherine Kramer; Ryan Baumwart; Rheal Towner; Yi Wu; Chung-Hao Lee
Journal:  J Mech Behav Biomed Mater       Date:  2018-07-18
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  1 in total

Review 1.  Machine Learning for Cardiovascular Biomechanics Modeling: Challenges and Beyond.

Authors:  Amirhossein Arzani; Jian-Xun Wang; Michael S Sacks; Shawn C Shadden
Journal:  Ann Biomed Eng       Date:  2022-04-20       Impact factor: 3.934

  1 in total

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