| Literature DB >> 33515713 |
Alpay Medetalibeyoglu1, Gulistan Bahat2, Naci Senkal1, Murat Kose1, Kader Avci3, Gozde Yesil Sayin4, Ummuhan Isoglu-Alkac5, Tufan Tukek1, Sacide Pehlivan3.
Abstract
BACKGROUND/Entities:
Keywords: COVID-19; Cytokine; Gene mutation; Hyperinflammation; MBL2; SARS-CoV-2
Year: 2021 PMID: 33515713 PMCID: PMC7838598 DOI: 10.1016/j.meegid.2021.104717
Source DB: PubMed Journal: Infect Genet Evol ISSN: 1567-1348 Impact factor: 3.342
Fig. 1Protein-protein interaction analysis. The proteins with a role in complement activation, complement activation, and lectin pathway of proteins and innate immune response are shown as blue, red and, green, respectively.
Fig. 2DNA fragments on agarose gel electrophoresis after restriction enzyme digestion of exon 1 of MBL gene. 349 bp PCR product was digested with BanI for codon 54 polymorphism ND). The normal allele (Allele A) is cut into two fragments with BanI, 89 bp, and 260 bp. The variant/mutant allele (Allele B) remains uncut. L: 100 bp DNA ladder ND: non-digested PCR product.
Clinical features and treatment regimens of Covid-19 patients (n = 284).
| Age (years) | 49 (19–92) |
| Sex (female vs males) | 128/ 156 (45.1% vs 54.9%) |
| Co-morbid diseases | |
| Hypertension | 72 (24.5%) |
| Diabetes mellitus | 36 (12.7%) |
| Chronic obstructive pulmonary disease | 30 (10.6%) |
| Coronary artery disease | 17 (6.0%) |
| Congestive heart failure | 5 (1.8%) |
| Solid malignancy | 26 (9.2%) |
| Hematological malignancy | 7 (2.5%) |
| Clinical course | |
| Severe vs mild | 94/190 (33.1% vs 66.9%) |
| Symptoms | |
| Dry cough | 170 (59.9%) |
| Fever | 154 (54.2%) |
| Myalgia | 145 (51.1%) |
| Dyspnea | 94 (33.1%) |
| Nausea/vomitus | 30 (10.6%) |
| Diarrhea | 23 (8.1%) |
| Anosmia/dysgeusia | 13 (4.6%) |
| Sputum | 1 (0.4%) |
| Physical examination findings on admission | |
| Fever | 94/190 (33.1%/66.9%) |
| Body temperature | 36.6 (35–40) |
| Saturation pO2 (peripheral) | 97 (87–100) |
| Systolic blood pressure | 130 (90–240) |
| Diastolic blood pressure | 75 (50–100) |
| Pulse (/min) | 92 (60–160) |
| Respiratory rate (/min) | 16 (12–40) |
| Laboratory evaluation | |
| pH | 7.41 (7.1–8.1) |
| pO2 | 62 (35–86) |
| pCO2 | 40 (23–63) |
| HCO3 | 24 (14–35) |
| Lactate | 1.5 (1–7) |
| Hemoglobin (g/dL) | 13.2 (6.3–18) |
| Leukocyte (/mm3) | 7130 (930–28,300) |
| Thrombocyte (/mm3) | 241,000 (66000–576,000) |
| Lymphocyte (/mm3) | 1390 (270–4520) |
| Lymphopenia (<800/mm3) | 57 (20.1%) |
| BUN (mg/dL) | 13 (5–107) |
| Creatinine (mg/dL) | 0.8 (0.4–6) |
| Glucose (mg/dL) | 106 (68–496) |
| AST (U/L) | 21 (10–409) |
| ALT (U/L) | 21 (2–493) |
| GGT (U/L) | 21 (4–744) |
| ALP (U/L) | 73 (33–400) |
| LDH (U/L) | 194 (78–731) |
| Total protein (g/dL) | 7.4 (5–9) |
| Albumin (g/dL) | 4.0 (2–5) |
| CRP (mg/dL) | 19.5 (1–363) |
| Procalcitonin (ng/mL) | 0.06 (0.2–50.0) |
| Ferritin | 166 (6–6656) |
| D-dimer | 58 (5–35,000) |
| Troponin-T | 4 (3–848) |
| Fibrinogen | 423 (151–1053) |
| INR | 0.9 (0.8–3.8) |
| aPTT | 28 (21–53) |
| Follow-up | |
| Mortality (at 28 days) | 9 (3.2%) |
| Intensive care unit need | 16 (6.3%) |
Data are given as numbers (%) or median (interquartile range).
Multivariate regression analysis for association of MBL gene variants with severe and mild disease.
| MBL Genotype | Severe disease ( | Mild disease ( | OR | 95% CI | p |
|---|---|---|---|---|---|
| AA | 44 (46.8%) | 137 (72.1%) | REFERENCE | ||
| AB | 29 (30.3%) | 43 (22.6%) | 2.9 | 1.5–5.7 | 0.001 |
| BB | 21 (22.4%) | 10 (5.3%) | 5.3 | 2.1–13.4 | <0.001 |
Dependent variable was: severe vs mild disease, independent variables were age, sex and MBL genetic variants.
Hosmer&Lemeshow Model ꭓ2 (8) = 4.40; p = 0.819.
significant association.
Multivariate regression analysis for association of MBL gene variants for intensive care unit.
| MBL Genotype | ICU need (n = 18) | No ICU need ( | OR | 95% CI | p |
|---|---|---|---|---|---|
| AA | 3 (33.3%) | 178 (66.9%) | REFERENCE | ||
| AB | 6 (66.7%) | 66 (24.8%) | 6.9 | 1.61–30.4 | 0.009 |
| BB | 9 (50%) | 22 (8.3%) | 19.6 | 4.6–83.3 | <0.001 |
Dependent variable was: intensive care need, independent variables were age, sex and MBL genetic variants.
Hosmer&Lemeshow Model ꭓ2 (8) = 5.489; p = 0.704.
ICU: intensive care unit.
significant association.
Multivariate regression analysis for association of MBL gene variants for early mortality and survival (n = 284).
| MBL Genotype | Mortality at 28 days (n = 9) | Survived at 28 days ( | p |
|---|---|---|---|
| AA | 0 (0%) | 181 (65.8%) | REFERENCE |
| AB | 3 (33.3%) | 69 (25.1%) | 0.99 |
| BB | 6 (67.7%) | 25 (9.1%) | 0.99 |
Dependent variable was: mortality at 28 days, independent variables were age, sex and MBL genetic variants.
Hosmer&Lemeshow Model ꭓ2 (8) = 0.76; p = 0.999.
Multivariate regression analysis for association of MBL gene variants with secondary bacterial infection in the follow-up.
| MBL Genotype | SBI (n = 27) | No SBI ( | OR | 95% CI | p |
|---|---|---|---|---|---|
| AA | 11 (40.7%) | 170 (66.1%) | REFERENCE | ||
| AB | 9 (33.3%) | 63 (24.5%) | 2.72 | 0.99–7.50 | 0.05 |
| BB | 7 (25.9%) | 24 (9.4%) | 2.81 | 0.90–8.75 | 0.07 |
Dependent variable was: development of secondary bacterial infection, independent variables were age, sex and MBL genetic variants.
Hosmer&Lemeshow Model ꭓ2 (8) = 10.05; p = 0.262.
SBI: secondary bacterial infection.