Literature DB >> 33514360

Molecular characterization of lumpy skin disease virus (LSDV) emerged in Bangladesh reveals unique genetic features compared to contemporary field strains.

Shukes Chandra Badhy1,2, Mohammad Golam Azam Chowdhury1,2, Tirumala Bharani Kumar Settypalli3, Giovanni Cattoli3, Charles Euloge Lamien3, Mohammad Aflak Uddin Fakir1,2, Shamima Akter1,2, Mozaffar Goni Osmani2, Faisol Talukdar2, Noorjahan Begum2, Izhar Ahmed Khan1,2, Md Bazlur Rashid1,2, Mohammad Sadekuzzaman4,5.   

Abstract

BACKGROUND: Lumpy skin disease (LSD) is a contagious viral disease of cattle caused by lumpy skin disease virus (LSDV). LSD has recently spread in Asia following outbreaks in the Middle East and Europe. The disease emerged in Bangladesh in July 2019 in the Chattogram district, then rapidly spread throughout the entire country. We investigated six LSD outbreaks in Bangladesh to record the clinical signs and collect samples for diagnostic confirmation. Furthermore, we performed the molecular characterization of Bangladesh isolates, analyzing the full RPO30 and GPCR genes and the partial EEV glycoprotein gene.
RESULTS: Clinical observations revealed common LSD clinical signs in the affected cattle. PCR and real-time PCR, showed the presence of the LSDV genome in samples from all six districts. Phylogenetic analysis and detailed inspection of multiple sequence alignments revealed that Bangladesh isolates differ from common LSDV field isolates encountered in Africa, the Middle East, and Europe, as well as newly emerged LSDV variants in Russia and China. Instead, they were closely related to LSDV KSGP-0240, LSDV NI2490, and LSDV Kenya.
CONCLUSIONS: These results show the importance of continuous monitoring and characterization of circulating strains and the need to continually refine the strategies for differentiating vaccine strains from field viruses.

Entities:  

Keywords:  Bangladesh; EEV glycoprotein; GPCR; Lumpy skin disease virus;Capripoxvirus;RPO30

Mesh:

Year:  2021        PMID: 33514360      PMCID: PMC7844896          DOI: 10.1186/s12917-021-02751-x

Source DB:  PubMed          Journal:  BMC Vet Res        ISSN: 1746-6148            Impact factor:   2.741


  40 in total

1.  Genome of lumpy skin disease virus.

Authors:  E R Tulman; C L Afonso; Z Lu; L Zsak; G F Kutish; D L Rock
Journal:  J Virol       Date:  2001-08       Impact factor: 5.103

2.  Capripoxvirus G-protein-coupled chemokine receptor: a host-range gene suitable for virus animal origin discrimination.

Authors:  Christian Le Goff; Charles Euloge Lamien; Emna Fakhfakh; Amélie Chadeyras; Elexpeter Aba-Adulugba; Geneviève Libeau; Eeva Tuppurainen; David B Wallace; Tajelser Adam; Roland Silber; Velý Gulyaz; Hafsa Madani; Philippe Caufour; Salah Hammami; Adama Diallo; Emmanuel Albina
Journal:  J Gen Virol       Date:  2009-04-01       Impact factor: 3.891

3.  Development and validation of three Capripoxvirus real-time PCRs for parallel testing.

Authors:  A Haegeman; K Zro; F Vandenbussche; L Demeestere; W Van Campe; M M Ennaji; K De Clercq
Journal:  J Virol Methods       Date:  2013-07-11       Impact factor: 2.014

4.  Improved detection of capripoxvirus in biopsy samples by PCR.

Authors:  D C Ireland; Y S Binepal
Journal:  J Virol Methods       Date:  1998-09       Impact factor: 2.014

5.  Emergence of a new lumpy skin disease virus variant in Kurgan Oblast, Russia, in 2018.

Authors:  Kononov Aleksandr; Prutnikov Pavel; Bjadovskaya Olga; Kononova Svetlana; Rusaleev Vladimir; Pestova Yana; Sprygin Alexander
Journal:  Arch Virol       Date:  2020-04-11       Impact factor: 2.574

6.  Development and validation of a TaqMan probe-based real-time PCR method for the differentiation of wild type lumpy skin disease virus from vaccine virus strains.

Authors:  Eirini I Agianniotaki; Serafeim C Chaintoutis; Andy Haegeman; Konstantia E Tasioudi; Ilse De Leeuw; Panagiotis-Dimitrios Katsoulos; Achilleas Sachpatzidis; Kris De Clercq; Thomas Alexandropoulos; Zoe S Polizopoulou; Eleni D Chondrokouki; Chrysostomos I Dovas
Journal:  J Virol Methods       Date:  2017-08-31       Impact factor: 2.014

7.  Evidence of recombination of vaccine strains of lumpy skin disease virus with field strains, causing disease.

Authors:  Alexander Sprygin; Yana Pestova; Olga Bjadovskaya; Pavel Prutnikov; Nikolay Zinyakov; Svetlana Kononova; Olga Ruchnova; Dmitiy Lozovoy; Ilya Chvala; Aleksandr Kononov
Journal:  PLoS One       Date:  2020-05-13       Impact factor: 3.240

8.  Differentiation of sheep pox and goat poxviruses by sequence analysis and PCR-RFLP of P32 gene.

Authors:  Madhusudan Hosamani; Bimalendu Mondal; Prabhakar A Tembhurne; Santanu Kumar Bandyopadhyay; Raj Kumar Singh; Thaha Jamal Rasool
Journal:  Virus Genes       Date:  2004-08       Impact factor: 2.198

9.  Lumpy skin disease of cattle: an emerging problem in the Sultanate of Oman.

Authors:  Mohamed Hassan Tageldin; David Brian Wallace; Gertruida Hermanna Gerdes; John Fraser Putterill; Roelf Rudolph Greyling; Maanda Noaxe Phosiwa; Rashied Mohammed Al Busaidy; Sultan Issa Al Ismaaily
Journal:  Trop Anim Health Prod       Date:  2013-10-07       Impact factor: 1.559

Review 10.  Review: Capripoxvirus Diseases: Current Status and Opportunities for Control.

Authors:  E S M Tuppurainen; E H Venter; J L Shisler; G Gari; G A Mekonnen; N Juleff; N A Lyons; K De Clercq; C Upton; T R Bowden; S Babiuk; L A Babiuk
Journal:  Transbound Emerg Dis       Date:  2015-11-13       Impact factor: 5.005

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  10 in total

1.  First Report of Lumpy Skin Disease in Myanmar and Molecular Analysis of the Field Virus Isolates.

Authors:  Min Thein Maw; Myint Myint Khin; David Hadrill; Irene Kasindi Meki; Tirumala Bharani Kumar Settypalli; Maung Maung Kyin; Win Win Myint; Wai Zin Thein; Ohnmar Aye; Elisa Palamara; Ye Tun Win; Giovanni Cattoli; Charles Euloge Lamien
Journal:  Microorganisms       Date:  2022-04-25

2.  An in-depth bioinformatic analysis of the novel recombinant lumpy skin disease virus strains: from unique patterns to established lineage.

Authors:  Alena Krotova; Olga Byadovskaya; Irina Shumilova; Antoinette van Schalkwyk; Alexander Sprygin
Journal:  BMC Genomics       Date:  2022-05-24       Impact factor: 4.547

3.  Molecular Characterization and Phylogenetic Analysis of Lumpy Skin Disease Virus Collected from Outbreaks in Northern Thailand in 2021.

Authors:  Tawatchai Singhla; Kittikorn Boonsri; Khwanchai Kreausukon; Wittawat Modethed; Kidsadagon Pringproa; Nattawooti Sthitmatee; Veerasak Punyapornwithaya; Paramintra Vinitchaikul
Journal:  Vet Sci       Date:  2022-04-18

4.  A Recombinant Vaccine-like Strain of Lumpy Skin Disease Virus Causes Low-Level Infection of Cattle through Virus-Inoculated Feed.

Authors:  Irina Shumilova; Alexander Nesterov; Olga Byadovskaya; Pavel Prutnikov; David B Wallace; Maria Mokeeva; Valeriy Pronin; Aleksandr Kononov; Ilya Chvala; Alexander Sprygin
Journal:  Pathogens       Date:  2022-08-16

5.  First detection and phylogenetic analysis of lumpy skin disease virus from Kinmen Island, Taiwan in 2020.

Authors:  Kuo-Jung Tsai; Yang-Chang Tu; Chieh-Hao Wu; Chih-Wei Huang; Lu-Jen Ting; Yu-Liang Huang; Chu-Hsiang Pan; Chia-Yi Chang; Ming-Chung Deng; Fan Lee
Journal:  J Vet Med Sci       Date:  2022-06-13       Impact factor: 1.105

6.  Molecular identification and characterization of Lumpy skin disease virus emergence from cattle in the northeastern part of Thailand.

Authors:  Tossapol Seerintra; Bhuripit Saraphol; Sitthichai Wankaew; Supawadee Piratae
Journal:  J Vet Sci       Date:  2022-08-09       Impact factor: 1.603

7.  Molecular Analysis of East African Lumpy Skin Disease Viruses Reveals a Mixed Isolate with Features of Both Vaccine and Field Isolates.

Authors:  Tesfaye Rufael Chibssa; Melaku Sombo; Jacqueline Kasiiti Lichoti; Tajelser Idris Badri Adam; Yang Liu; Yazeed Abd Elraouf; Reingard Grabherr; Tirumala Bharani K Settypalli; Francisco J Berguido; Angelika Loitsch; Mesfin Sahle; Giovanni Cattoli; Adama Diallo; Charles Euloge Lamien
Journal:  Microorganisms       Date:  2021-05-26

8.  Investigation of Post Vaccination Reactions of Two Live Attenuated Vaccines against Lumpy Skin Disease of Cattle.

Authors:  Zahra Bamouh; Jihane Hamdi; Siham Fellahi; Slimane Khayi; Mohammed Jazouli; Khalid Omari Tadlaoui; Ouafaa Fassi Fihri; Eeva Tuppurainen; Mehdi Elharrak
Journal:  Vaccines (Basel)       Date:  2021-06-08

9.  Validation of TaqMan-Based Assays for Specific Detection and Differentiation of Wild-Type and Neethling Vaccine Strains of LSDV.

Authors:  Dejan Vidanović; Bojana Tešović; Milanko Šekler; Zoran Debeljak; Nikola Vasković; Kazimir Matović; Andrey Koltsov; Kiril Krstevski; Tamaš Petrović; Ilse De Leeuw; Andy Haegeman
Journal:  Microorganisms       Date:  2021-06-06

10.  Molecular Characterization of the 2020 Outbreak of Lumpy Skin Disease in Nepal.

Authors:  Pragya Koirala; Irene Kasindi Meki; Manju Maharjan; Bharani Kumar Settypalli; Salina Manandhar; Sanjay Kumar Yadav; Giovanni Cattoli; Charles Euloge Lamien
Journal:  Microorganisms       Date:  2022-02-28
  10 in total

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