Literature DB >> 33511711

Clinical validation of 13-gene DNA methylation analysis in oral brushing samples for detection of oral carcinoma: Italian multicenter study.

Davide B Gissi1, Luca Morandi2, Giuseppe Colella3, Roberto De Luca3, Giuseppina Campisi4, Rodolfo Mauceri4, Umberto Romeo5, Gianluca Tenore5, Michele D Mignogna6, Daniela Adamo6, Giacomo Oteri7, Antonia Marcianò7, Paolo Vescovi8, Marco Meleti8, Rosario Serpico3, Dario Di Stasio3, Monica Pentenero9, Andrea Santarelli10, Alberto Bianchi11, Salvatore Crimi11, Claudio Marchetti12, Achille Tarsitano12, Maria Pia Foschini13, Lucio Montebugnoli1.   

Abstract

BACKGROUND: The aim of this Italian multicenter study was to evaluate the diagnostic performance of a minimally invasive method for the detection of oral squamous cell carcinoma (OSCC) based on 13-gene DNA methylation analysis in oral brushing samples.
METHODS: Oral brushing specimens were collected in 11 oral medicine centers across Italy. Twenty brushing specimens were collected by each center, 10 from patients with OSCC, and 10 from healthy volunteers. DNA methylation analysis was performed in blindness, and each sample was determined as positive or negative based on a predefined cutoff value.
RESULTS: DNA amplification failed in 4 of 220 (1.8%) samples. Of the specimens derived from patients with OSCC, 93.6% (103/110) were detected as positive, and 84.9% (90/106) of the samples from healthy volunteers were negative.
CONCLUSION: These data confirmed the diagnostic performance of our novel procedure in a large cohort of brushing specimens collected from 11 different centers and analyzed in blindness.
© 2021 Wiley Periodicals LLC.

Entities:  

Keywords:  algorithm; bisulfite sequencing; diagnostic test; oral brushing; oral squamous cell carcinoma; quantitative DNA methylation analysis

Year:  2021        PMID: 33511711     DOI: 10.1002/hed.26624

Source DB:  PubMed          Journal:  Head Neck        ISSN: 1043-3074            Impact factor:   3.147


  5 in total

1.  Protein Cargo of Salivary Small Extracellular Vesicles as Potential Functional Signature of Oral Squamous Cell Carcinoma.

Authors:  Simona Fontana; Rodolfo Mauceri; Maria Eugenia Novara; Riccardo Alessandro; Giuseppina Campisi
Journal:  Int J Mol Sci       Date:  2021-10-16       Impact factor: 5.923

2.  A 13-Gene DNA Methylation Analysis Using Oral Brushing Specimens as an Indicator of Oral Cancer Risk: A Descriptive Case Report.

Authors:  Roberto Rossi; Davide B Gissi; Andrea Gabusi; Viscardo Paolo Fabbri; Tiziana Balbi; Achille Tarsitano; Luca Morandi
Journal:  Diagnostics (Basel)       Date:  2022-01-23

3.  Brush swab as a noninvasive surrogate for tissue biopsies in epigenomic profiling of oral cancer.

Authors:  Chi T Viet; Xinyu Zhang; Ke Xu; Gary Yu; Kesava Asam; Carissa M Thomas; Nicholas F Callahan; Coleen Doan; Paul C Walker; Khanh Nguyen; Stephanie C Kidd; Steve C Lee; Anupama Grandhi; Clint T Allen; Simon Young; James C Melville; Jonathan W Shum; Dan T Viet; Alan S Herford; Dylan F Roden; Manuel L Gonzalez; Jiang F Zhong; Bradley E Aouizerat
Journal:  Biomark Res       Date:  2021-12-20

4.  Feasibility of a novel non-invasive swab technique for serial whole-exome sequencing of cervical tumors during chemoradiation therapy.

Authors:  Julianna K Bronk; Chiraag Kapadia; Xiaogang Wu; Bhavana V Chapman; Rui Wang; Tatiana V Karpinets; Xingzhi Song; Andrew M Futreal; Jianhua Zhang; Ann H Klopp; Lauren E Colbert
Journal:  PLoS One       Date:  2022-10-06       Impact factor: 3.752

Review 5.  Contribution of Genomics to the Surgical Management and Study of Oral Cancer.

Authors:  Zuzana Saidak; Claire Lailler; Sylvie Testelin; Bruno Chauffert; Florian Clatot; Antoine Galmiche
Journal:  Ann Surg Oncol       Date:  2021-04-12       Impact factor: 5.344

  5 in total

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