Literature DB >> 33510590

Genome editing technologies: CRISPR, LEAPER, RESTORE, ARCUT, SATI, and RESCUE.

Senay Görücü Yilmaz1.   

Abstract

Genome editing technologies include techniques used for desired genetic modifications and allow the insertion, modification or deletion of specific DNA fragments. Recent advances in genome biology offer unprecedented promise for interdisciplinary collaboration and applications in gene editing. New genome editing technologies enable specific and efficient genome modifications. The sources that inspire these modifications and already exist in the genome are DNA degradation enzymes and DNA repair pathways. Six of these recent technologies are the clustered regularly interspaced short palindromic repeats (CRISPR), leveraging endogenous ADAR for programmable editing of RNA (LEAPER), recruiting endogenous ADAR to specific transcripts for oligonucleotide-mediated RNA editing (RESTORE), chemistry-based artificial restriction DNA cutter (ARCUT), single homology arm donor mediated intron-targeting integration (SATI), RNA editing for specific C-to-U exchange (RESCUE). These technologies are widely used from various biomedical researches to clinics, agriculture, and allow you to rearrange genomic sequences, create cell lines and animal models to solve human diseases. This review emphasizes the characteristics, superiority, limitations, also whether each technology can be used in different biological systems and the potential application of these systems in the treatment of several human diseases.
Copyright © 2021 Görücü Yilmaz.

Entities:  

Keywords:  bioengineering; gene therapy; genome editing; genome editing technologies

Year:  2021        PMID: 33510590      PMCID: PMC7838830          DOI: 10.17179/excli2020-3070

Source DB:  PubMed          Journal:  EXCLI J        ISSN: 1611-2156            Impact factor:   4.068


  130 in total

1.  Cas4 Nucleases Can Effect Specific Integration of CRISPR Spacers.

Authors:  Zhufeng Zhang; Saifu Pan; Tao Liu; Yingjun Li; Nan Peng
Journal:  J Bacteriol       Date:  2019-05-22       Impact factor: 3.490

Review 2.  CRISPR/Cas Systems towards Next-Generation Biosensing.

Authors:  Yi Li; Shiyuan Li; Jin Wang; Guozhen Liu
Journal:  Trends Biotechnol       Date:  2019-01-14       Impact factor: 19.536

Review 3.  The next generation of CRISPR-Cas technologies and applications.

Authors:  Adrian Pickar-Oliver; Charles A Gersbach
Journal:  Nat Rev Mol Cell Biol       Date:  2019-08       Impact factor: 94.444

4.  A-to-I editing in the miRNA seed region regulates target mRNA selection and silencing efficiency.

Authors:  Hideaki Kume; Kimihiro Hino; Josephine Galipon; Kumiko Ui-Tei
Journal:  Nucleic Acids Res       Date:  2014-07-23       Impact factor: 16.971

5.  Structural basis for DNase activity of a conserved protein implicated in CRISPR-mediated genome defense.

Authors:  Blake Wiedenheft; Kaihong Zhou; Martin Jinek; Scott M Coyle; Wendy Ma; Jennifer A Doudna
Journal:  Structure       Date:  2009-06-10       Impact factor: 5.006

6.  RNA-DNA hybrids promote the expansion of Friedreich's ataxia (GAA)n repeats via break-induced replication.

Authors:  Alexander J Neil; Miranda U Liang; Alexandra N Khristich; Kartik A Shah; Sergei M Mirkin
Journal:  Nucleic Acids Res       Date:  2018-04-20       Impact factor: 16.971

Review 7.  Delivering on the promise of gene editing for cystic fibrosis.

Authors:  Craig A Hodges; Ronald A Conlon
Journal:  Genes Dis       Date:  2018-11-25

8.  Efficient allelic-drive in Drosophila.

Authors:  Annabel Guichard; Tisha Haque; Marketta Bobik; Xiang-Ru S Xu; Carissa Klanseck; Raja Babu Singh Kushwah; Mateus Berni; Bhagyashree Kaduskar; Valentino M Gantz; Ethan Bier
Journal:  Nat Commun       Date:  2019-04-09       Impact factor: 14.919

Review 9.  CRISPR-Cas: biology, mechanisms and relevance.

Authors:  Frank Hille; Emmanuelle Charpentier
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2016-11-05       Impact factor: 6.237

Review 10.  CRISPR-Based Diagnosis of Infectious and Noninfectious Diseases.

Authors:  Somayeh Jolany Vangah; Camellia Katalani; Hannah A Booneh; Abbas Hajizade; Adna Sijercic; Gholamreza Ahmadian
Journal:  Biol Proced Online       Date:  2020-09-14       Impact factor: 3.244

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  1 in total

Review 1.  An Outlook on Global Regulatory Landscape for Genome-Edited Crops.

Authors:  Aftab Ahmad; Nayla Munawar; Zulqurnain Khan; Alaa T Qusmani; Sultan Habibullah Khan; Amer Jamil; Sidra Ashraf; Muhammad Zubair Ghouri; Sabin Aslam; Muhammad Salman Mubarik; Ahmad Munir; Qaiser Sultan; Kamel A Abd-Elsalam; Sameer H Qari
Journal:  Int J Mol Sci       Date:  2021-10-29       Impact factor: 5.923

  1 in total

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