Literature DB >> 33510160

Single-cell transcriptomic reveals molecular diversity and developmental heterogeneity of human stem cell-derived oligodendrocyte lineage cells.

Xitiz Chamling1, Alyssa Kallman2, Weixiang Fang3, Cynthia A Berlinicke1, Joseph L Mertz1, Prajwal Devkota4, Itzy E Morales Pantoja5, Matthew D Smith5, Zhicheng Ji3, Calvin Chang6, Aniruddha Kaushik7, Liben Chen7, Katharine A Whartenby5, Peter A Calabresi5,8, Hai-Quan Mao6,9,10, Hongkai Ji3, Tza-Huei Wang6,7, Donald J Zack11,12,13,14.   

Abstract

Injury and loss of oligodendrocytes can cause demyelinating diseases such as multiple sclerosis. To improve our understanding of human oligodendrocyte development, which could facilitate development of remyelination-based treatment strategies, here we describe time-course single-cell-transcriptomic analysis of developing human stem cell-derived oligodendrocyte-lineage-cells (hOLLCs). The study includes hOLLCs derived from both genome engineered embryonic stem cell (ESC) reporter cells containing an Identification-and-Purification tag driven by the endogenous PDGFRα promoter and from unmodified induced pluripotent (iPS) cells. Our analysis uncovers substantial transcriptional heterogeneity of PDGFRα-lineage hOLLCs. We discover sub-populations of human oligodendrocyte progenitor cells (hOPCs) including a potential cytokine-responsive hOPC subset, and identify candidate regulatory genes/networks that define the identity of these sub-populations. Pseudotime trajectory analysis defines developmental pathways of oligodendrocytes vs astrocytes from PDGFRα-expressing hOPCs and predicts differentially expressed genes between the two lineages. In addition, pathway enrichment analysis followed by pharmacological intervention of these pathways confirm that mTOR and cholesterol biosynthesis signaling pathways are involved in maturation of oligodendrocytes from hOPCs.

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Year:  2021        PMID: 33510160      PMCID: PMC7844020          DOI: 10.1038/s41467-021-20892-3

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  75 in total

1.  Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets.

Authors:  Evan Z Macosko; Anindita Basu; Rahul Satija; James Nemesh; Karthik Shekhar; Melissa Goldman; Itay Tirosh; Allison R Bialas; Nolan Kamitaki; Emily M Martersteck; John J Trombetta; David A Weitz; Joshua R Sanes; Alex K Shalek; Aviv Regev; Steven A McCarroll
Journal:  Cell       Date:  2015-05-21       Impact factor: 41.582

2.  Comprehensive Integration of Single-Cell Data.

Authors:  Tim Stuart; Andrew Butler; Paul Hoffman; Christoph Hafemeister; Efthymia Papalexi; William M Mauck; Yuhan Hao; Marlon Stoeckius; Peter Smibert; Rahul Satija
Journal:  Cell       Date:  2019-06-06       Impact factor: 41.582

Review 3.  Molecular Control of Oligodendrocyte Development.

Authors:  Benayahu Elbaz; Brian Popko
Journal:  Trends Neurosci       Date:  2019-02-12       Impact factor: 13.837

4.  MicroRNA-mediated control of oligodendrocyte differentiation.

Authors:  Xianghui Zhao; Xuelian He; Xiaolei Han; Yang Yu; Feng Ye; Ying Chen; ThaoNguyen Hoang; Xiaomei Xu; Qing-Sheng Mi; Mei Xin; Fan Wang; Bruce Appel; Q Richard Lu
Journal:  Neuron       Date:  2010-03-11       Impact factor: 17.173

5.  Human embryonic stem cells differentiate into oligodendrocytes in high purity and myelinate after spinal cord transplantation.

Authors:  Gabriel I Nistor; Minodora O Totoiu; Nadia Haque; Melissa K Carpenter; Hans S Keirstead
Journal:  Glia       Date:  2005-02       Impact factor: 7.452

6.  A global double-fluorescent Cre reporter mouse.

Authors:  Mandar Deepak Muzumdar; Bosiljka Tasic; Kazunari Miyamichi; Ling Li; Liqun Luo
Journal:  Genesis       Date:  2007-09       Impact factor: 2.487

7.  Highly efficient neural conversion of human ES and iPS cells by dual inhibition of SMAD signaling.

Authors:  Stuart M Chambers; Christopher A Fasano; Eirini P Papapetrou; Mark Tomishima; Michel Sadelain; Lorenz Studer
Journal:  Nat Biotechnol       Date:  2009-03-01       Impact factor: 54.908

8.  Expression of multiple transgenes from a single construct using viral 2A peptides in Drosophila.

Authors:  Richard W Daniels; Adam J Rossano; Gregory T Macleod; Barry Ganetzky
Journal:  PLoS One       Date:  2014-06-19       Impact factor: 3.240

9.  2A self-cleaving peptide-based multi-gene expression system in the silkworm Bombyx mori.

Authors:  Yuancheng Wang; Feng Wang; Riyuan Wang; Ping Zhao; Qingyou Xia
Journal:  Sci Rep       Date:  2015-11-05       Impact factor: 4.379

Review 10.  Hedgehog: A Key Signaling in the Development of the Oligodendrocyte Lineage.

Authors:  Elisabeth Traiffort; Mary Zakaria; Yousra Laouarem; Julien Ferent
Journal:  J Dev Biol       Date:  2016-09-08
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  9 in total

1.  Single-nucleus transcriptome analysis reveals cell-type-specific molecular signatures across reward circuitry in the human brain.

Authors:  Matthew N Tran; Kristen R Maynard; Abby Spangler; Louise A Huuki; Kelsey D Montgomery; Vijay Sadashivaiah; Madhavi Tippani; Brianna K Barry; Dana B Hancock; Stephanie C Hicks; Joel E Kleinman; Thomas M Hyde; Leonardo Collado-Torres; Andrew E Jaffe; Keri Martinowich
Journal:  Neuron       Date:  2021-09-27       Impact factor: 18.688

2.  Reactive Astrocytes Derived From Human Induced Pluripotent Stem Cells Suppress Oligodendrocyte Precursor Cell Differentiation.

Authors:  Matthew D Smith; Xitiz Chamling; Alexander J Gill; Hector Martinez; Weifeng Li; Kathryn C Fitzgerald; Elias S Sotirchos; Dorota Moroziewicz; Lauren Bauer; Daniel Paull; Marjan Gharagozloo; Pavan Bhargava; Donald J Zack; Valentina Fossati; Peter A Calabresi
Journal:  Front Mol Neurosci       Date:  2022-05-06       Impact factor: 6.261

3.  Rapid and Efficient Generation of Myelinating Human Oligodendrocytes in Organoids.

Authors:  Mohammed R Shaker; Giovanni Pietrogrande; Sally Martin; Ju-Hyun Lee; Woong Sun; Ernst J Wolvetang
Journal:  Front Cell Neurosci       Date:  2021-03-17       Impact factor: 5.505

4.  Virally encoded connectivity transgenic overlay RNA sequencing (VECTORseq) defines projection neurons involved in sensorimotor integration.

Authors:  Victoria Cheung; Philip Chung; Max Bjorni; Varvara A Shvareva; Yesenia C Lopez; Evan H Feinberg
Journal:  Cell Rep       Date:  2021-12-21       Impact factor: 9.423

Review 5.  Replenishing the Aged Brains: Targeting Oligodendrocytes and Myelination?

Authors:  Xi Zhang; Nanxin Huang; Lan Xiao; Fei Wang; Tao Li
Journal:  Front Aging Neurosci       Date:  2021-11-25       Impact factor: 5.750

6.  Parkinson's disease and multiple system atrophy patient iPSC-derived oligodendrocytes exhibit alpha-synuclein-induced changes in maturation and immune reactive properties.

Authors:  Carla Azevedo; Gabriel Teku; Yuriy Pomeshchik; Juan F Reyes; Margarita Chumarina; Kaspar Russ; Ekaterina Savchenko; Anna Hammarberg; Nuno Jorge Lamas; Anna Collin; Gunnar K Gouras; Oxana Klementieva; Martin Hallbeck; Ricardo Taipa; Mauno Vihinen; Laurent Roybon
Journal:  Proc Natl Acad Sci U S A       Date:  2022-03-16       Impact factor: 11.205

Review 7.  Glial Patchwork: Oligodendrocyte Progenitor Cells and Astrocytes Blanket the Central Nervous System.

Authors:  Heather M Barber; Maria F Ali; Sarah Kucenas
Journal:  Front Cell Neurosci       Date:  2022-01-05       Impact factor: 5.505

8.  Expression of Lineage Transcription Factors Identifies Differences in Transition States of Induced Human Oligodendrocyte Differentiation.

Authors:  Florian J Raabe; Marius Stephan; Jan Benedikt Waldeck; Verena Huber; Damianos Demetriou; Nirmal Kannaiyan; Sabrina Galinski; Laura V Glaser; Michael C Wehr; Michael J Ziller; Andrea Schmitt; Peter Falkai; Moritz J Rossner
Journal:  Cells       Date:  2022-01-11       Impact factor: 6.600

9.  Transient astrocyte-like NG2 glia subpopulation emerges solely following permanent brain ischemia.

Authors:  Denisa Kirdajova; Lukas Valihrach; Martin Valny; Jan Kriska; Daniela Krocianova; Sarka Benesova; Pavel Abaffy; Daniel Zucha; Ruslan Klassen; Denisa Kolenicova; Pavel Honsa; Mikael Kubista; Miroslava Anderova
Journal:  Glia       Date:  2021-07-27       Impact factor: 8.073

  9 in total

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