Literature DB >> 33508002

Evaluation of a multiplex PCR method for the detection of porcine parvovirus types 1 through 7 using various field samples.

Seung-Chai Kim1, Chang-Gi Jeong1, Salik Nazki1,2, Sim-In Lee1,3, Ye-Chan Baek1, Yong-Jin Jung1, Won-Il Kim1.   

Abstract

Porcine parvoviruses (PPVs) are small, nonenveloped DNA viruses that are widespread in the global pig population. PPV type 1 (PPV1) is a major causative agent of reproductive failure and has been recognized since the 1960s. In recent decades, novel PPVs have been identified and designated as PPVs 2 through 7 (PPV2~PPV7). Although the epidemiological impacts of these newly recognized parvoviruses on pigs are largely unknown, continuous surveillance of these PPVs is needed. The aim of this study was to develop an improved and efficient detection tool for these PPVs and to assess the developed method with field samples. Using 7 sets of newly designed primers, a multiplex polymerase chain reaction (mPCR) protocol was developed for the simultaneous detection of the seven genotypes of PPV (PPV1~PPV7). The sensitivity of the mPCR assay was analyzed, and the detection limit was determined to be 3×103 viral copies. The assay was highly specific in detecting one or more of the viruses in various combinations in specimens. The mPCR method was evaluated with 80 serum samples, 40 lung or lymph node samples and 40 intestine or fecal samples. When applied to these samples, the mPCR method could detect the 7 viruses simultaneously, providing rapid results regarding infection and coinfection status. In conclusion, the developed mPCR assay can be utilized as an effective and accurate diagnostic tool for rapid differential detection and epidemiological surveillance of various PPVs in numerous types of field samples.

Entities:  

Year:  2021        PMID: 33508002      PMCID: PMC7842984          DOI: 10.1371/journal.pone.0245699

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.240


  35 in total

Review 1.  Multiplex PCR: optimization and application in diagnostic virology.

Authors:  E M Elnifro; A M Ashshi; R J Cooper; P E Klapper
Journal:  Clin Microbiol Rev       Date:  2000-10       Impact factor: 26.132

2.  A TaqMan-based real-time PCR for detection and quantification of porcine parvovirus 4.

Authors:  Danielle Gava; Carine K Souza; Rejane Schaefer; Amy L Vincent; Maurício E Cantão; Arlei Coldebella; Janice R Ciacci-Zanella
Journal:  J Virol Methods       Date:  2015-03-23       Impact factor: 2.014

3.  Circulation of Porcine Parvovirus Types 1 through 6 in Serum Samples Obtained from Six Commercial Polish Pig Farms.

Authors:  J Cui; K Biernacka; J Fan; P F Gerber; T Stadejek; T Opriessnig
Journal:  Transbound Emerg Dis       Date:  2016-11-24       Impact factor: 5.005

Review 4.  Parvovirus variation for disease: a difference with RNA viruses?

Authors:  A López-Bueno; L P Villarreal; J M Almendral
Journal:  Curr Top Microbiol Immunol       Date:  2006       Impact factor: 4.291

5.  Evolutionary relationships among parvoviruses: virus-host coevolution among autonomous primate parvoviruses and links between adeno-associated and avian parvoviruses.

Authors:  V V Lukashov; J Goudsmit
Journal:  J Virol       Date:  2001-03       Impact factor: 5.103

6.  A multiplex PCR for rapid and simultaneous detection of porcine circovirus type 2, porcine parvovirus, porcine pseudorabies virus, and porcine reproductive and respiratory syndrome virus in clinical specimens.

Authors:  Fengxiong Yue; Shangjin Cui; Chaofan Zhang; Kyoung-Jin Yoon
Journal:  Virus Genes       Date:  2009-02-12       Impact factor: 2.332

7.  Development and validation of a multiplex conventional PCR assay for simultaneous detection and grouping of porcine bocaviruses.

Authors:  Xiaowen Zheng; Gaopeng Liu; Tanja Opriessnig; Zining Wang; Zongqi Yang; Yonghou Jiang
Journal:  J Virol Methods       Date:  2016-07-19       Impact factor: 2.014

8.  Multiplex PCR for rapid detection of pseudorabies virus, porcine parvovirus and porcine circoviruses.

Authors:  Chienjin Huang; Jui-Jung Hung; Ching-Ying Wu; Maw-Sheng Chien
Journal:  Vet Microbiol       Date:  2004-07-14       Impact factor: 3.293

9.  Identification and genomic characterization of a novel porcine parvovirus (PPV6) in China.

Authors:  Jianqiang Ni; Caixia Qiao; Xue Han; Tao Han; Wenhua Kang; Zhanchao Zi; Zhen Cao; Xinyan Zhai; Xuepeng Cai
Journal:  Virol J       Date:  2014-12-02       Impact factor: 4.099

10.  First identification of porcine parvovirus 6 in North America by viral metagenomic sequencing of serum from pigs infected with porcine reproductive and respiratory syndrome virus.

Authors:  Erin E Schirtzinger; Andrew W Suddith; Benjamin M Hause; Richard A Hesse
Journal:  Virol J       Date:  2015-10-16       Impact factor: 4.099

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  2 in total

1.  A Systematic Investigation Unveils High Coinfection Status of Porcine Parvovirus Types 1 through 7 in China from 2016 to 2020.

Authors:  Jixiang Li; Yanzhao Xiao; Ming Qiu; Xinshuai Li; Shubin Li; Hong Lin; Xiangdong Li; Jianzhong Zhu; Nanhua Chen
Journal:  Microbiol Spectr       Date:  2021-12-01

2.  Prevalence of porcine parvovirus 1 through 7 (PPV1-PPV7) and co-factor association with PCV2 and PRRSV in Korea.

Authors:  Seung-Chai Kim; Jae-Hong Kim; Jae-Yeob Kim; Gyeong-Seo Park; Chang-Gi Jeong; Won-Il Kim
Journal:  BMC Vet Res       Date:  2022-04-09       Impact factor: 2.741

  2 in total

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