Literature DB >> 33504047

BrainSeg-Net: Brain Tumor MR Image Segmentation via Enhanced Encoder-Decoder Network.

Mobeen Ur Rehman1,2, SeungBin Cho1, Jeehong Kim3, Kil To Chong1,4.   

Abstract

Efficient segmentation of Magnetic Resonance (MR) brain tumor images is of the utmost value for the diagnosis of tumor region. In recent years, advancement in the field of neural networks has been used to refine the segmentation performance of brain tumor sub-regions. The brain tumor segmentation has proven to be a complicated task even for neural networks, due to the small-scale tumor regions. These small-scale tumor regions are unable to be identified, the reason being their tiny size and the huge difference between area occupancy by different tumor classes. In previous state-of-the-art neural network models, the biggest problem was that the location information along with spatial details gets lost in deeper layers. To address these problems, we have proposed an encoder-decoder based model named BrainSeg-Net. The Feature Enhancer (FE) block is incorporated into the BrainSeg-Net architecture which extracts the middle-level features from low-level features from the shallow layers and shares them with the dense layers. This feature aggregation helps to achieve better performance of tumor identification. To address the problem associated with imbalance class, we have used a custom-designed loss function. For evaluation of BrainSeg-Net architecture, three benchmark datasets are utilized: BraTS2017, BraTS 2018, and BraTS 2019. Segmentation of Enhancing Core (EC), Whole Tumor (WT), and Tumor Core (TC) is carried out. The proposed architecture have exhibited good improvement when compared with existing baseline and state-of-the-art techniques. The MR brain tumor segmentation by BrainSeg-Net uses enhanced location and spatial features, which performs better than the existing plethora of brain MR image segmentation approaches.

Entities:  

Keywords:  Feature Enhancer (FE); Magnetic Resonance (MR) Images; brain tumor; diagnostics; medical imaging; semantic segmentation

Year:  2021        PMID: 33504047     DOI: 10.3390/diagnostics11020169

Source DB:  PubMed          Journal:  Diagnostics (Basel)        ISSN: 2075-4418


  6 in total

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2.  Logistic Regression-Based Model Is More Efficient Than U-Net Model for Reliable Whole Brain Magnetic Resonance Imaging Segmentation.

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3.  ProB-Site: Protein Binding Site Prediction Using Local Features.

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Journal:  Cells       Date:  2022-07-05       Impact factor: 7.666

4.  A Case Study of Quantizing Convolutional Neural Networks for Fast Disease Diagnosis on Portable Medical Devices.

Authors:  Mukhammed Garifulla; Juncheol Shin; Chanho Kim; Won Hwa Kim; Hye Jung Kim; Jaeil Kim; Seokin Hong
Journal:  Sensors (Basel)       Date:  2021-12-29       Impact factor: 3.576

5.  AI-Based Pipeline for Classifying Pediatric Medulloblastoma Using Histopathological and Textural Images.

Authors:  Omneya Attallah; Shaza Zaghlool
Journal:  Life (Basel)       Date:  2022-02-03

6.  Polish Multi-Institutional Study of Children with Ependymoma-Clinical Practice Outcomes in the Light of Prospective Trials.

Authors:  Aleksandra Napieralska; Agnieszka Mizia-Malarz; Weronika Stolpa; Ewa Pawłowska; Małgorzata A Krawczyk; Katarzyna Konat-Bąska; Aneta Kaczorowska; Arkadiusz Brąszewski; Maciej Harat
Journal:  Diagnostics (Basel)       Date:  2021-12-14
  6 in total

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