Literature DB >> 33503953

Developing a Simulated Online Model That Integrates GNSS, Accelerometer and Weather Data to Detect Parturition Events in Grazing Sheep: A Machine Learning Approach.

Eloise S Fogarty1, David L Swain1, Greg M Cronin2, Luis E Moraes3, Derek W Bailey4, Mark Trotter1.   

Abstract

In the current study, a simulated online parturition detection model is developed and reported. Using a machine learning (ML)-based approach, the model incorporates data from Global Navigation Satellite System (GNSS) tracking collars, accelerometer ear tags and local weather data, with the aim of detecting parturition events in pasture-based sheep. The specific objectives were two-fold: (i) determine which sensor systems and features provide the most useful information for lambing detection; (ii) evaluate how these data might be integrated using ML classification to alert to a parturition event as it occurs. Two independent field trials were conducted during the 2017 and 2018 lambing seasons in New Zealand, with the data from each used for ML training and independent validation, respectively. Based on objective (i), four features were identified as exerting the greatest importance for lambing detection: mean distance to peers (MDP), MDP compared to the flock mean (MDP.Mean), closest peer (CP) and posture change (PC). Using these four features, the final ML was able to detect 27% and 55% of lambing events within ±3 h of birth with no prior false positives. If the model sensitivity was manipulated such that earlier false positives were permissible, this detection increased to 91% and 82% depending on the requirement for a single alert, or two consecutive alerts occurring. To identify the potential causes of model failure, the data of three animals were investigated further. Lambing detection appeared to rely on increased social isolation behaviour in addition to increased PC behaviour. The results of the study support the use of integrated sensor data for ML-based detection of parturition events in grazing sheep. This is the first known application of ML classification for the detection of lambing in pasture-based sheep. Application of this knowledge could have significant impacts on the ability to remotely monitor animals in commercial situations, with a logical extension of the information for remote monitoring of animal welfare.

Entities:  

Keywords:  machine learning; on-animal sensors; parturition; sheep

Year:  2021        PMID: 33503953      PMCID: PMC7911250          DOI: 10.3390/ani11020303

Source DB:  PubMed          Journal:  Animals (Basel)        ISSN: 2076-2615            Impact factor:   2.752


  21 in total

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Authors:  J C Broster; R L Dehaan; D L Swain; S M Robertson; B J King; M A Friend
Journal:  J Anim Sci       Date:  2017-01       Impact factor: 3.159

Review 2.  Using tri-axial acceleration data to identify behavioral modes of free-ranging animals: general concepts and tools illustrated for griffon vultures.

Authors:  Ran Nathan; Orr Spiegel; Scott Fortmann-Roe; Roi Harel; Martin Wikelski; Wayne M Getz
Journal:  J Exp Biol       Date:  2012-03-15       Impact factor: 3.312

3.  Temperament, age and weather predict social interaction in the sheep flock.

Authors:  Rebecca E Doyle; John C Broster; Kirsty Barnes; William J Browne
Journal:  Behav Processes       Date:  2016-08-16       Impact factor: 1.777

4.  Monitoring Animal Behaviour and Environmental Interactions Using Wireless Sensor Networks, GPS Collars and Satellite Remote Sensing.

Authors:  Rebecca N Handcock; Dave L Swain; Greg J Bishop-Hurley; Kym P Patison; Tim Wark; Philip Valencia; Peter Corke; Christopher J O'Neill
Journal:  Sensors (Basel)       Date:  2009-05-13       Impact factor: 3.576

5.  Improving the accuracy of estimates of animal path and travel distance using GPS drift-corrected dead reckoning.

Authors:  Oliver P Dewhirst; Hannah K Evans; Kyle Roskilly; Richard J Harvey; Tatjana Y Hubel; Alan M Wilson
Journal:  Ecol Evol       Date:  2016-08-03       Impact factor: 2.912

6.  Predicting Lameness in Sheep Activity Using Tri-Axial Acceleration Signals.

Authors:  Jamie Barwick; David Lamb; Robin Dobos; Derek Schneider; Mitchell Welch; Mark Trotter
Journal:  Animals (Basel)       Date:  2018-01-11       Impact factor: 2.752

7.  Using Acceleration Data to Automatically Detect the Onset of Farrowing in Sows.

Authors:  Imke Traulsen; Christoph Scheel; Wolfgang Auer; Onno Burfeind; Joachim Krieter
Journal:  Sensors (Basel)       Date:  2018-01-10       Impact factor: 3.576

8.  Optimal classifier for imbalanced data using Matthews Correlation Coefficient metric.

Authors:  Sabri Boughorbel; Fethi Jarray; Mohammed El-Anbari
Journal:  PLoS One       Date:  2017-06-02       Impact factor: 3.240

9.  A Combined Offline and Online Algorithm for Real-Time and Long-Term Classification of Sheep Behaviour: Novel Approach for Precision Livestock Farming.

Authors:  Jorge A Vázquez-Diosdado; Veronica Paul; Keith A Ellis; David Coates; Radhika Loomba; Jasmeet Kaler
Journal:  Sensors (Basel)       Date:  2019-07-20       Impact factor: 3.576

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  3 in total

1.  Body Weight Prediction from Linear Measurements of Icelandic Foals: A Machine Learning Approach.

Authors:  Alicja Satoła; Jarosław Łuszczyński; Weronika Petrych; Krzysztof Satoła
Journal:  Animals (Basel)       Date:  2022-05-11       Impact factor: 3.231

Review 2.  ASAS-NANP Symposium: Mathematical Modeling in Animal Nutrition: Opportunities and challenges of confined and extensive precision livestock production.

Authors:  Hector M Menendez; Jameson R Brennan; Charlotte Gaillard; Krista Ehlert; Jaelyn Quintana; Suresh Neethirajan; Aline Remus; Marc Jacobs; Izabelle A M A Teixeira; Benjamin L Turner; Luis O Tedeschi
Journal:  J Anim Sci       Date:  2022-06-01       Impact factor: 3.338

3.  Analysis of Accelerometer and GPS Data for Cattle Behaviour Identification and Anomalous Events Detection.

Authors:  Javier Cabezas; Roberto Yubero; Beatriz Visitación; Jorge Navarro-García; María Jesús Algar; Emilio L Cano; Felipe Ortega
Journal:  Entropy (Basel)       Date:  2022-02-26       Impact factor: 2.524

  3 in total

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