Literature DB >> 33500780

Recognizing the value of software: a software citation guide.

Daniel S Katz1, Neil P Chue Hong2, Tim Clark3, August Muench4, Shelley Stall5, Daina Bouquin6, Matthew Cannon7, Scott Edmunds8, Telli Faez9, Patricia Feeney10, Martin Fenner11, Michael Friedman12, Gerry Grenier13, Melissa Harrison14, Joerg Heber15, Adam Leary16, Catriona MacCallum17, Hollydawn Murray18, Erika Pastrana19, Katherine Perry20, Douglas Schuster21, Martina Stockhause22, Jake Yeston23.   

Abstract

Software is as integral as a research paper, monograph, or dataset in terms of facilitating the full understanding and dissemination of research. This article provides broadly applicable guidance on software citation for the communities and institutions publishing academic journals and conference proceedings. We expect those communities and institutions to produce versions of this document with software examples and citation styles that are appropriate for their intended audience. This article (and those community-specific versions) are aimed at authors citing software, including software developed by the authors or by others. We also include brief instructions on how software can be made citable, directing readers to more comprehensive guidance published elsewhere. The guidance presented in this article helps to support proper attribution and credit, reproducibility, collaboration and reuse, and encourages building on the work of others to further research. Copyright:
© 2021 Katz DS et al.

Entities:  

Keywords:  Software citation; bibliometrics; guidelines; publishing; scholarly communication

Year:  2020        PMID: 33500780      PMCID: PMC7805487          DOI: 10.12688/f1000research.26932.2

Source DB:  PubMed          Journal:  F1000Res        ISSN: 2046-1402


  2 in total

1.  A data citation roadmap for scholarly data repositories.

Authors:  Martin Fenner; Mercè Crosas; Jeffrey S Grethe; David Kennedy; Henning Hermjakob; Phillippe Rocca-Serra; Gustavo Durand; Robin Berjon; Sebastian Karcher; Maryann Martone; Tim Clark
Journal:  Sci Data       Date:  2019-04-10       Impact factor: 6.444

2.  A data citation roadmap for scientific publishers.

Authors:  Helena Cousijn; Amye Kenall; Emma Ganley; Melissa Harrison; David Kernohan; Thomas Lemberger; Fiona Murphy; Patrick Polischuk; Simone Taylor; Maryann Martone; Tim Clark
Journal:  Sci Data       Date:  2018-11-20       Impact factor: 6.444

  2 in total
  6 in total

1.  A survey of the state of the practice for research software in the United States.

Authors:  Jeffrey C Carver; Nic Weber; Karthik Ram; Sandra Gesing; Daniel S Katz
Journal:  PeerJ Comput Sci       Date:  2022-05-05

2.  FAIRSCAPE: a Framework for FAIR and Reproducible Biomedical Analytics.

Authors:  Maxwell Adam Levinson; Justin Niestroy; Sadnan Al Manir; Karen Fairchild; Douglas E Lake; J Randall Moorman; Timothy Clark
Journal:  Neuroinformatics       Date:  2021-07-15

Review 3.  Managing the life cycle of a portfolio of open data resources at the SIB Swiss Institute of Bioinformatics.

Authors:  Chiara Gabella; Severine Duvaud; Christine Durinx
Journal:  Brief Bioinform       Date:  2022-01-17       Impact factor: 11.622

4.  Understanding progress in software citation: a study of software citation in the CORD-19 corpus.

Authors:  Caifan Du; Johanna Cohoon; Patrice Lopez; James Howison
Journal:  PeerJ Comput Sci       Date:  2022-07-25

5.  Ten simple rules for getting and giving credit for data.

Authors:  Elisha M Wood-Charlson; Zachary Crockett; Chris Erdmann; Adam P Arkin; Carly B Robinson
Journal:  PLoS Comput Biol       Date:  2022-09-29       Impact factor: 4.779

6.  The role of software in science: a knowledge graph-based analysis of software mentions in PubMed Central.

Authors:  David Schindler; Felix Bensmann; Stefan Dietze; Frank Krüger
Journal:  PeerJ Comput Sci       Date:  2022-01-14
  6 in total

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