Literature DB >> 33499954

Microbial symbiosis and coevolution of an entire clade of ancient vertebrates: the gut microbiota of sea turtles and its relationship to their phylogenetic history.

Titus Franciscus Scheelings1, Robert J Moore2, Thi Thu Hao Van2, Marcel Klaassen3, Richard D Reina4.   

Abstract

BACKGROUND: The microbiota plays a critical role in host homeostasis and has been shown to be a major driving force in host evolution. However, our understanding of these important relationships is hampered by a lack of data for many species, and by significant gaps in sampling of the evolutionary tree. In this investigation we improve our understanding of the host-microbiome relationship by obtaining samples from all seven extant species of sea turtle, and correlate microbial compositions with host evolutionary history.
RESULTS: Our analysis shows that the predominate phyla in the microbiota of nesting sea turtles was Proteobacteria. We also demonstrate a strong relationship between the bacterial phyla SR1 and sea turtle phylogeny, and that sea turtle microbiotas have changed very slowly over time in accordance with their similarly slow phenotypic changes.
CONCLUSIONS: This is one of the most comprehensive microbiota studies to have been performed in a single clade of animals and further improves our knowledge of how microbial populations have influenced vertebrate evolution.

Entities:  

Keywords:  Evolution; Microbiota; Phylogeny; Sea turtle

Year:  2020        PMID: 33499954      PMCID: PMC7807503          DOI: 10.1186/s42523-020-00034-8

Source DB:  PubMed          Journal:  Anim Microbiome        ISSN: 2524-4671


  88 in total

1.  Biochemical and microbiological evidence for fermentative digestion in free-living land iguanas (Conolophus pallidus) and marine iguanas (Amblyrhynchus cristatus) on the Galápagos archipelago.

Authors:  Roderick I Mackie; Mathew Rycyk; Rebecca L Ruemmler; Rustam I Aminov; Martin Wikelski
Journal:  Physiol Biochem Zool       Date:  2004 Jan-Feb       Impact factor: 2.247

2.  Search and clustering orders of magnitude faster than BLAST.

Authors:  Robert C Edgar
Journal:  Bioinformatics       Date:  2010-08-12       Impact factor: 6.937

3.  Diet specialization selects for an unusual and simplified gut microbiota in two- and three-toed sloths.

Authors:  Kimberly A Dill-McFarland; Paul J Weimer; Jonathan N Pauli; M Zachariah Peery; Garret Suen
Journal:  Environ Microbiol       Date:  2015-09-10       Impact factor: 5.491

Review 4.  Gut Microbiotas and Host Evolution: Scaling Up Symbiosis.

Authors:  Michael Shapira
Journal:  Trends Ecol Evol       Date:  2016-03-30       Impact factor: 17.712

5.  Gestation alters the gut microbiota of an oviparous lizard.

Authors:  Brian K Trevelline; Kirsty J MacLeod; Tracy Langkilde; Kevin D Kohl
Journal:  FEMS Microbiol Ecol       Date:  2019-07-01       Impact factor: 4.194

6.  Population genetics and phylogeography of sea turtles.

Authors:  B W Bowen; S A Karl
Journal:  Mol Ecol       Date:  2007-10-16       Impact factor: 6.185

7.  Discrimination of the oral microbiota associated with high hydrogen sulfide and methyl mercaptan production.

Authors:  Toru Takeshita; Nao Suzuki; Yoshio Nakano; Masaki Yasui; Masahiro Yoneda; Yoshihiro Shimazaki; Takao Hirofuji; Yoshihisa Yamashita
Journal:  Sci Rep       Date:  2012-01-09       Impact factor: 4.379

8.  Metagenomics of the Svalbard reindeer rumen microbiome reveals abundance of polysaccharide utilization loci.

Authors:  Phillip B Pope; Alasdair K Mackenzie; Ivan Gregor; Wendy Smith; Monica A Sundset; Alice C McHardy; Mark Morrison; Vincent G H Eijsink
Journal:  PLoS One       Date:  2012-06-06       Impact factor: 3.240

9.  Inheritance and Establishment of Gut Microbiota in Chickens.

Authors:  Jinmei Ding; Ronghua Dai; Lingyu Yang; Chuan He; Ke Xu; Shuyun Liu; Wenjing Zhao; Lu Xiao; Lingxiao Luo; Yan Zhang; He Meng
Journal:  Front Microbiol       Date:  2017-10-10       Impact factor: 5.640

Review 10.  An ecological and evolutionary perspective on human-microbe mutualism and disease.

Authors:  Les Dethlefsen; Margaret McFall-Ngai; David A Relman
Journal:  Nature       Date:  2007-10-18       Impact factor: 69.504

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  4 in total

1.  Unveiling the egg microbiota of the loggerhead sea turtle Caretta caretta in nesting beaches of the Mediterranean Sea.

Authors:  Luca Vecchioni; Antonino Pace; Arianna Sucato; Flavia Berlinghieri; Irene Cambera; Giulia Visconti; Sandra Hochscheid; Marco Arculeo; Rosa Alduina
Journal:  PLoS One       Date:  2022-05-26       Impact factor: 3.752

2.  Host phylogeny and host ecology structure the mammalian gut microbiota at different taxonomic scales.

Authors:  Connie A Rojas; Santiago Ramírez-Barahona; Kay E Holekamp; Kevin R Theis
Journal:  Anim Microbiome       Date:  2021-04-23

Review 3.  What lives on and in the sea turtle? A literature review of sea turtle bacterial microbiota.

Authors:  Samantha G Kuschke
Journal:  Anim Microbiome       Date:  2022-09-08

4.  Is Habitat More Important than Phylogenetic Relatedness for Elucidating the Gut Bacterial Composition in Sister Lizard Species?

Authors:  Mauricio Hernández; Sergio Ancona; Aníbal H Díaz De La Vega-Pérez; Ligia C Muñoz-Arenas; Stephanie E Hereira-Pacheco; Yendi E Navarro-Noya
Journal:  Microbes Environ       Date:  2022       Impact factor: 2.596

  4 in total

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