Literature DB >> 33499637

When do short-range atomistic machine-learning models fall short?

Shuwen Yue1, Maria Carolina Muniz1, Marcos F Calegari Andrade2, Linfeng Zhang3, Roberto Car2, Athanassios Z Panagiotopoulos1.   

Abstract

We explore the role of long-range interactions in atomistic machine-learning models by analyzing the effects on fitting accuracy, isolated cluster properties, and bulk thermodynamic properties. Such models have become increasingly popular in molecular simulations given their ability to learn highly complex and multi-dimensional interactions within a local environment; however, many of them fundamentally lack a description of explicit long-range interactions. In order to provide a well-defined benchmark system with precisely known pairwise interactions, we chose as the reference model a flexible version of the Extended Simple Point Charge (SPC/E) water model. Our analysis shows that while local representations are sufficient for predictions of the condensed liquid phase, the short-range nature of machine-learning models falls short in representing cluster and vapor phase properties. These findings provide an improved understanding of the role of long-range interactions in machine learning models and the regimes where they are necessary.

Entities:  

Year:  2021        PMID: 33499637     DOI: 10.1063/5.0031215

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  6 in total

1.  Gaussian Process Regression for Materials and Molecules.

Authors:  Volker L Deringer; Albert P Bartók; Noam Bernstein; David M Wilkins; Michele Ceriotti; Gábor Csányi
Journal:  Chem Rev       Date:  2021-08-16       Impact factor: 60.622

Review 2.  Enhanced-Sampling Simulations for the Estimation of Ligand Binding Kinetics: Current Status and Perspective.

Authors:  Katya Ahmad; Andrea Rizzi; Riccardo Capelli; Davide Mandelli; Wenping Lyu; Paolo Carloni
Journal:  Front Mol Biosci       Date:  2022-06-08

Review 3.  Artificial Intelligence for Autonomous Molecular Design: A Perspective.

Authors:  Rajendra P Joshi; Neeraj Kumar
Journal:  Molecules       Date:  2021-11-09       Impact factor: 4.411

4.  Machine learning potentials for complex aqueous systems made simple.

Authors:  Christoph Schran; Fabian L Thiemann; Patrick Rowe; Erich A Müller; Ondrej Marsalek; Angelos Michaelides
Journal:  Proc Natl Acad Sci U S A       Date:  2021-09-21       Impact factor: 11.205

5.  Combining Machine Learning and Computational Chemistry for Predictive Insights Into Chemical Systems.

Authors:  John A Keith; Valentin Vassilev-Galindo; Bingqing Cheng; Stefan Chmiela; Michael Gastegger; Klaus-Robert Müller; Alexandre Tkatchenko
Journal:  Chem Rev       Date:  2021-07-07       Impact factor: 60.622

6.  Self-consistent determination of long-range electrostatics in neural network potentials.

Authors:  Ang Gao; Richard C Remsing
Journal:  Nat Commun       Date:  2022-03-23       Impact factor: 14.919

  6 in total

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