Literature DB >> 33499162

The Development of a Standardized Quality Assessment Material to Support Xpert® HIV-1 Viral Load Testing for ART Monitoring in South Africa.

Lara Dominique Noble1, Lesley Erica Scott1, Asiashu Bongwe2, Pedro Da Silva2, Wendy Susan Stevens1,2.   

Abstract

The tiered laboratory framework for human immunodeficiency virus (HIV) viral load monitoring accommodates a range of HIV viral load testing platforms, with quality assessment critical to ensure quality patient testing. HIV plasma viral load testing is challenged by the instability of viral RNA. An approach using an RNA stabilizing buffer is described for the Xpert® HIV-1 Viral Load (Cepheid) assay and was tested in remote laboratories in South Africa. Plasma panels with known HIV viral titres were prepared in PrimeStore molecular transport medium for per-module verification and per-instrument external quality assessment. The panels were transported at ambient temperatures to 13 testing laboratories during 2017 and 2018, tested according to standard procedures and uploaded to a web portal for analysis. A total of 275 quality assessment specimens (57 verification panels and two EQA cycles) were tested. All participating laboratories met study verification criteria (n = 171 specimens) with an overall concordance correlation coefficient (ρc) of 0.997 (95% confidence interval (CI): 0.996 to 0.998) and a mean bias of -0.019 log copies per milliliter (cp/mL) (95% CI: -0.044 to 0.063). The overall EQA ρc (n = 104 specimens) was 0.999 (95% CI: 0.998 to 0.999), with a mean bias of 0.03 log cp/mL (95% CI: 0.02 to 0.05). These panels are suitable for use in quality monitoring of Xpert® HIV-1 VL and are applicable to laboratories in remote settings.

Entities:  

Keywords:  HIV viral load; PrimeStore MTM0; external quality assessment; quality; thermostable; verification

Year:  2021        PMID: 33499162      PMCID: PMC7911816          DOI: 10.3390/diagnostics11020160

Source DB:  PubMed          Journal:  Diagnostics (Basel)        ISSN: 2075-4418


  53 in total

1.  Stringent HIV Viral Load Threshold for Virological Failure Using Dried Blood Spots: Is the Perfect the Enemy of the Good?

Authors:  Seth C Inzaule; Raph L Hamers; Clement E Zeh; Tobias F Rinke de Wit
Journal:  J Acquir Immune Defic Syndr       Date:  2016-01-01       Impact factor: 3.731

2.  Xpert(®) MTB/RIF detection of Mycobacterium tuberculosis from sputum collected in molecular transport medium.

Authors:  L T Daum; P B Fourie; R P H Peters; J D Rodriguez; S A Worthy; M Khubbar; S Bhattacharyya; M S Gradus; T Mboneni; E E Marubini; C Helm; J P Chambers; G W Fischer
Journal:  Int J Tuberc Lung Dis       Date:  2016-08       Impact factor: 2.373

3.  Performance monitoring of mycobacterium tuberculosis dried culture spots for use with the GeneXpert system within a national program in South Africa.

Authors:  N Gous; B Cunningham; B Kana; W Stevens; L E Scott
Journal:  J Clin Microbiol       Date:  2013-09-25       Impact factor: 5.948

4.  Commercial products to preserve specimens for tuberculosis diagnosis: a systematic review.

Authors:  B W P Reeve; S M McFall; R Song; R Warren; K R Steingart; G Theron
Journal:  Int J Tuberc Lung Dis       Date:  2018-07-01       Impact factor: 2.373

5.  Long-term stability of human immunodeficiency virus viral load and infectivity in whole blood.

Authors:  A M Vandamme; K Van Laethem; J C Schmit; E Van Wijngaerden; M Reynders; Z Debyser; M Witvrouw; M Van Ranst; E De Clercq; J Desmyter
Journal:  Eur J Clin Invest       Date:  1999-05       Impact factor: 4.686

6.  Performance of Cepheid Xpert HIV-1 viral load plasma assay to accurately detect treatment failure.

Authors:  Jilian A Sacks; Youyi Fong; Mercedes Perez Gonzalez; Mauro Andreotti; Shrikala Baliga; Nigel Garrett; Jeanne Jordan; Etienne Karita; Smita Kulkarni; Orna Mor; Fausta Mosha; Zibusiso Ndlovu; Jean-Christophe Plantier; Shanmugam Saravanan; Lesley Scott; Trevor Peter; Meg Doherty; Lara Vojnov
Journal:  AIDS       Date:  2019-10-01       Impact factor: 4.177

7.  PrimeStore MTM and OMNIgene Sputum for the Preservation of Sputum for Xpert MTB/RIF Testing in Nigeria.

Authors:  John S Bimba; Lovett Lawson; Konstantina Kontogianni; Thomas Edwards; Bassey Emanna Ekpenyong; James Dodd; Emily R Adams; Derek J Sloan; Jacob Creswell; Jose Dominguez; Luis E Cuevas
Journal:  J Clin Med       Date:  2019-12-04       Impact factor: 4.241

Review 8.  A decentralised point-of-care testing model to address inequities in the COVID-19 response.

Authors:  Belinda Hengel; Louise Causer; Susan Matthews; Kirsty Smith; Kelly Andrewartha; Steven Badman; Brooke Spaeth; Annie Tangey; Phillip Cunningham; Emily Phillips; James Ward; Caroline Watts; Jonathan King; Tanya Applegate; Mark Shephard; Rebecca Guy
Journal:  Lancet Infect Dis       Date:  2020-12-23       Impact factor: 25.071

9.  Performance of the Xpert HIV-1 Viral Load Assay: a Systematic Review and Meta-analysis.

Authors:  Madlen Nash; Sophie Huddart; Sayema Badar; Shrikala Baliga; Kavitha Saravu; Madhukar Pai
Journal:  J Clin Microbiol       Date:  2018-03-26       Impact factor: 5.948

10.  Evaluation of Commercially Available Viral Transport Medium (VTM) for SARS-CoV-2 Inactivation and Use in Point-of-Care (POC) Testing.

Authors:  David van Bockel; C Mee Ling Munier; Stuart Turville; Steven G Badman; Gregory Walker; Alberto Ospina Stella; Anupriya Aggarwal; Malinna Yeang; Anna Condylios; Anthony D Kelleher; Tanya L Applegate; Andrew Vallely; David Whiley; William Rawlinson; Phillip Cunningham; John Kaldor; Rebecca Guy
Journal:  Viruses       Date:  2020-10-23       Impact factor: 5.048

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