Literature DB >> 33494220

Navigating the Collagen Jungle: The Biomedical Potential of Fiber Organization in Cancer.

Jonathan N Ouellette1,2, Cole R Drifka1,2, Kelli B Pointer2, Yuming Liu2, Tyler J Lieberthal1, W John Kao1,3, John S Kuo4, Agnes G Loeffler5, Kevin W Eliceiri1,2,6,7.   

Abstract

Recent research has highlighted the importance of key tumor microenvironment features, notably the collagen-rich extracellular matrix (ECM) in characterizing tumor invasion and progression. This led to great interest from both basic researchers and clinicians, including pathologists, to include collagen fiber evaluation as part of the investigation of cancer development and progression. Fibrillar collagen is the most abundant in the normal extracellular matrix, and was revealed to be upregulated in many cancers. Recent studies suggested an emerging theme across multiple cancer types in which specific collagen fiber organization patterns differ between benign and malignant tissue and also appear to be associated with disease stage, prognosis, treatment response, and other clinical features. There is great potential for developing image-based collagen fiber biomarkers for clinical applications, but its adoption in standard clinical practice is dependent on further translational and clinical evaluations. Here, we offer a comprehensive review of the current literature of fibrillar collagen structure and organization as a candidate cancer biomarker, and new perspectives on the challenges and next steps for researchers and clinicians seeking to exploit this information in biomedical research and clinical workflows.

Entities:  

Keywords:  ECM; cancer; extracellular matrix; fibrillar collagen; pathology; prognosis; tumor microenvironment

Year:  2021        PMID: 33494220     DOI: 10.3390/bioengineering8020017

Source DB:  PubMed          Journal:  Bioengineering (Basel)        ISSN: 2306-5354


  7 in total

1.  A workflow for rapid unbiased quantification of fibrillar feature alignment in biological images.

Authors:  Stefania Marcotti; Deandra Belo de Freitas; Lee D Troughton; Fiona N Kenny; Tanya J Shaw; Brian M Stramer; Patrick W Oakes
Journal:  Front Comput Sci       Date:  2021-10-14

2.  Gene Expression Analysis Provides New Insights into the Mechanism of Intramuscular Fat Formation in Japanese Black Cattle.

Authors:  Shuji Ueda; Mana Hosoda; Ken-Ichi Yoshino; Minoru Yamanoue; Yasuhito Shirai
Journal:  Genes (Basel)       Date:  2021-07-21       Impact factor: 4.096

3.  Postnatal structural development of mammalian Basilar Membrane provides anatomical basis for the maturation of tonotopic maps and frequency tuning.

Authors:  Tomomi Tani; Maki Koike-Tani; Mai Thi Tran; Michael Shribak; Snezana Levic
Journal:  Sci Rep       Date:  2021-04-07       Impact factor: 4.379

4.  Multiphoton Microscopy for Identifying Collagen Signatures Associated with Biochemical Recurrence in Prostate Cancer Patients.

Authors:  Ina P Pavlova; Sujit S Nair; Dara Lundon; Stanislaw Sobotka; Reza Roshandel; Patrick-Julien Treacy; Parita Ratnani; Rachel Brody; Jonathan I Epstein; Gustavo E Ayala; Natasha Kyprianou; Ashutosh K Tewari
Journal:  J Pers Med       Date:  2021-10-22

5.  Biomimetic hydrogel supports initiation and growth of patient-derived breast tumor organoids.

Authors:  Elisabeth Prince; Jennifer Cruickshank; Wail Ba-Alawi; Kelsey Hodgson; Jillian Haight; Chantal Tobin; Andrew Wakeman; Alona Avoulov; Valentina Topolskaia; Mitchell J Elliott; Alison P McGuigan; Hal K Berman; Benjamin Haibe-Kains; David W Cescon; Eugenia Kumacheva
Journal:  Nat Commun       Date:  2022-03-18       Impact factor: 14.919

6.  Intratumor graph neural network recovers hidden prognostic value of multi-biomarker spatial heterogeneity.

Authors:  Lida Qiu; Deyong Kang; Chuan Wang; Wenhui Guo; Fangmeng Fu; Qingxiang Wu; Gangqin Xi; Jiajia He; Liqin Zheng; Qingyuan Zhang; Xiaoxia Liao; Lianhuang Li; Jianxin Chen; Haohua Tu
Journal:  Nat Commun       Date:  2022-07-22       Impact factor: 17.694

7.  A pan-cancer analysis of matrisome proteins reveals CTHRC1 and a related network as major ECM regulators across cancers.

Authors:  Keerthi Harikrishnan; Srinivas Sheshagiri Prabhu; Nagaraj Balasubramanian
Journal:  PLoS One       Date:  2022-10-03       Impact factor: 3.752

  7 in total

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