Literature DB >> 33493614

The clinical relevance of gene expression based prognostic signatures in colorectal cancer.

Pankaj Ahluwalia1, Ravindra Kolhe2, Gagandeep K Gahlay3.   

Abstract

Colorectal cancer (CRC) is one of the most prevalent cancers, with more than one million new cases every year. In the last few decades, several advancements in therapeutic and preventative levels have reduced the mortality rate, but new biomarkers are required for improved prognosis. The alterations at the genetic and epigenetic level have been recognized as major players in tumorigenesis. The products of gene expression in the form of mRNA, microRNA, and long-noncoding RNA, have started to emerge as important regulatory molecules, playing an important role in cancer. Gene-expression based prognostic risk scores, which quantify and compare their expression, have emerged as promising biomarkers with enormous clinical value. These composite multi-gene models in which more than one gene is used to predict prognosis have been shown to be significantly effective in identifying patients with multiple clinico-pathological risks like overall mortality, response to chemotherapy, risk of metastasis, etc. The advent of microarray and advanced sequencing technologies have led to the generation of large datasets like TCGA (The Cancer Genome Atlas) and GEO (Gene Expression Omnibus), which have fueled the search for new biomarkers. Continuous evaluation of these candidate biomarkers in clinical settings is promising to improve the management of CRC. These composite gene signatures provide potential in identifying high-risk patients, which might help clinicians to better manage these patients and design appropriate personalized therapeutic interventions. In this review, we emphasize on composite prognostic scores from diverse resources with clinical utility in CRC.
Copyright © 2021 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Colon cancer; Colorectal cancer; Gene expression; Prognostic genes; Survival specific gene expression

Year:  2021        PMID: 33493614     DOI: 10.1016/j.bbcan.2021.188513

Source DB:  PubMed          Journal:  Biochim Biophys Acta Rev Cancer        ISSN: 0304-419X            Impact factor:   10.680


  24 in total

1.  Comprehensive bioinformatics analysis of functional molecules in colorectal cancer.

Authors:  Tao Meng; Zhangzhang Lan; Xiaoling Zhao; Li Niu; Chuan Chen; Wenyong Zhang
Journal:  J Gastrointest Oncol       Date:  2022-02

2.  Multi-omics characterization of the unsaturated fatty acid biosynthesis pathway in colon cancer.

Authors:  Ling Chen; Chang-Shun Yang; Si-Dong Chen; Qiao-Xia Zhou; Guo-Qiang Wang; Shang-Li Cai; Wei-Hua Li; Hong-Zhi Luo
Journal:  Am J Cancer Res       Date:  2022-08-15       Impact factor: 5.942

3.  ESRRG, ATP4A, and ATP4B as Diagnostic Biomarkers for Gastric Cancer: A Bioinformatic Analysis Based on Machine Learning.

Authors:  Qiu Chen; Yu Wang; Yongjun Liu; Bin Xi
Journal:  Front Physiol       Date:  2022-06-23       Impact factor: 4.755

4.  Prognostic and therapeutic implications of extracellular matrix associated gene signature in renal clear cell carcinoma.

Authors:  Pankaj Ahluwalia; Meenakshi Ahluwalia; Ashis K Mondal; Nikhil Sahajpal; Vamsi Kota; Mumtaz V Rojiani; Amyn M Rojiani; Ravindra Kolhe
Journal:  Sci Rep       Date:  2021-04-07       Impact factor: 4.379

5.  Deep-Learning-Based Cancer Profiles Classification Using Gene Expression Data Profile.

Authors:  Hatim Z Almarzouki
Journal:  J Healthc Eng       Date:  2022-01-07       Impact factor: 2.682

6.  Predicting the Survival and Immune Landscape of Colorectal Cancer Patients Using an Immune-Related lncRNA Pair Model.

Authors:  Chao Ma; Xin Zhang; Xudong Zhao; Nan Zhang; Sixin Zhou; Yonghui Zhang; Peiyu Li
Journal:  Front Genet       Date:  2021-09-06       Impact factor: 4.599

7.  UBE2T promotes autophagy via the p53/AMPK/mTOR signaling pathway in lung adenocarcinoma.

Authors:  Jinhong Zhu; Haijiao Ao; Mingdong Liu; Kui Cao; Jianqun Ma
Journal:  J Transl Med       Date:  2021-08-30       Impact factor: 5.531

8.  Clinical and molecular assessment of an onco-immune signature with prognostic significance in patients with colorectal cancer.

Authors:  Pankaj Ahluwalia; Ashis K Mondal; Meenakshi Ahluwalia; Nikhil S Sahajpal; Kimya Jones; Yasmeen Jilani; Gagandeep K Gahlay; Amanda Barrett; Vamsi Kota; Amyn M Rojiani; Ravindra Kolhe
Journal:  Cancer Med       Date:  2022-02-09       Impact factor: 4.452

9.  Development and Validation of a 7-Gene Prognostic Signature to Improve Survival Prediction in Pancreatic Ductal Adenocarcinoma.

Authors:  Zengyu Feng; Hao Qian; Kexian Li; Jianyao Lou; Yulian Wu; Chenghong Peng
Journal:  Front Mol Biosci       Date:  2021-05-21

10.  The expression and prognostic value of Src homology 2 domain-containing transforming protein C3 (SHC3) and its potential role in colorectal cancer.

Authors:  Chedong Zhao; Jian Zhang; Jing Ma; Ning Zhang; Wei Chen
Journal:  Transl Cancer Res       Date:  2021-07       Impact factor: 1.241

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