Literature DB >> 33493555

Epigenomic regulation by labile iron.

Vladimir Camarena1, Tyler C Huff2, Gaofeng Wang3.   

Abstract

Iron is an essential micronutrient metal for cellular functions but can generate highly reactive oxygen species resulting in oxidative damage. For these reasons its uptake and metabolism is highly regulated. A small but dynamic fraction of ferrous iron inside the cell, termed intracellular labile iron, is redox-reactive and ready to participate multiples reactions of intracellular enzymes. Due to its nature its determination and precise quantification has been a roadblock. However, recent progress in the development of intracellular labile iron probes are allowing the reevaluation of our current understanding and unmasking new functions. The role of intracellular labile iron in regulating the epigenome was recently discovered. This chapter examine how intracellular labile iron can modulate histone and DNA demethylation and how its pool can mediate a signaling pathway from cAMP serving as a sensor of the metabolic needs of the cells.
Copyright © 2021. Published by Elsevier Inc.

Entities:  

Keywords:  DNA methylation; G-protein coupled receptor; Histone methylation; Intracellular labile Fe(II); Iron; JmjC domain-containing demethylases; RapGEF2; Reactive oxygen species; TET methylcytosine Dioxygenases; cAMP

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Year:  2021        PMID: 33493555      PMCID: PMC8217092          DOI: 10.1016/j.freeradbiomed.2021.01.026

Source DB:  PubMed          Journal:  Free Radic Biol Med        ISSN: 0891-5849            Impact factor:   8.101


  115 in total

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Authors:  Dimitrios Galaris; Michalis Mantzaris; Christos Amorgianiotis
Journal:  Hormones (Athens)       Date:  2008 Apr-Jun       Impact factor: 2.885

Review 2.  Activity-based sensing fluorescent probes for iron in biological systems.

Authors:  Allegra T Aron; Audrey G Reeves; Christopher J Chang
Journal:  Curr Opin Chem Biol       Date:  2018-01-05       Impact factor: 8.822

3.  Thymine DNA glycosylase can rapidly excise 5-formylcytosine and 5-carboxylcytosine: potential implications for active demethylation of CpG sites.

Authors:  Atanu Maiti; Alexander C Drohat
Journal:  J Biol Chem       Date:  2011-08-23       Impact factor: 5.157

4.  Engineering Iron Responses in Mammalian Cells by Signal-Induced Protein Proximity.

Authors:  Guihua Zeng; Huanqiu Li; Yongyi Wei; Weimin Xuan; Roushu Zhang; Larisa E Breden; Wei Wang; Fu-Sen Liang
Journal:  ACS Synth Biol       Date:  2017-02-24       Impact factor: 5.110

5.  Bioimaging and Biosensing of Ferrous Ion in Neurons and HepG2 Cells upon Oxidative Stress.

Authors:  Zhichao Liu; Shengnan Wang; Wanying Li; Yang Tian
Journal:  Anal Chem       Date:  2018-02-08       Impact factor: 6.986

6.  Targeting the lysosome: fluorescent iron(III) chelators to selectively monitor endosomal/lysosomal labile iron pools.

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Journal:  J Med Chem       Date:  2008-07-15       Impact factor: 7.446

7.  TIM-2 is expressed on B cells and in liver and kidney and is a receptor for H-ferritin endocytosis.

Authors:  Thomas T Chen; Li Li; Dong-Hui Chung; Christopher D C Allen; Suzy V Torti; Frank M Torti; Jason G Cyster; Chih-Ying Chen; Frances M Brodsky; Eréne C Niemi; Mary C Nakamura; William E Seaman; Michael R Daws
Journal:  J Exp Med       Date:  2005-10-03       Impact factor: 14.307

8.  Altered Expression of Mitoferrin and Frataxin, Larger Labile Iron Pool and Greater Mitochondrial DNA Damage in the Skeletal Muscle of Older Adults.

Authors:  Anna Picca; Sunil K Saini; Robert T Mankowski; George Kamenov; Stephen D Anton; Todd M Manini; Thomas W Buford; Stephanie E Wohlgemuth; Rui Xiao; Riccardo Calvani; Hélio José Coelho-Júnior; Francesco Landi; Roberto Bernabei; David A Hood; Emanuele Marzetti; Christiaan Leeuwenburgh
Journal:  Cells       Date:  2020-12-02       Impact factor: 6.600

9.  Redox-active quinones induces genome-wide DNA methylation changes by an iron-mediated and Tet-dependent mechanism.

Authors:  Bailin Zhao; Ying Yang; Xiaoli Wang; Zechen Chong; Ruichuan Yin; Shu-Hui Song; Chao Zhao; Cuiping Li; Hua Huang; Bao-Fa Sun; Danni Wu; Kang-Xuan Jin; Maoyong Song; Ben-Zhan Zhu; Guibin Jiang; Jannie M Rendtlew Danielsen; Guo-Liang Xu; Yun-Gui Yang; Hailin Wang
Journal:  Nucleic Acids Res       Date:  2013-11-08       Impact factor: 16.971

10.  Vitamin C induces Tet-dependent DNA demethylation and a blastocyst-like state in ES cells.

Authors:  Kathryn Blaschke; Kevin T Ebata; Mohammad M Karimi; Jorge A Zepeda-Martínez; Preeti Goyal; Sahasransu Mahapatra; Angela Tam; Diana J Laird; Martin Hirst; Anjana Rao; Matthew C Lorincz; Miguel Ramalho-Santos
Journal:  Nature       Date:  2013-06-30       Impact factor: 49.962

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  3 in total

1.  Aberrant redox biology and epigenetic reprogramming: Co-conspirators across multiple human diseases.

Authors:  Frederick E Domann; Michael J Hitchler
Journal:  Free Radic Biol Med       Date:  2021-04-29       Impact factor: 8.101

2.  The Labile Iron Pool Reacts Rapidly and Catalytically with Peroxynitrite.

Authors:  André Luís Condeles; José Carlos Toledo Junior
Journal:  Biomolecules       Date:  2021-09-09

Review 3.  Iron in leaves: chemical forms, signalling, and in-cell distribution.

Authors:  Máté Sági-Kazár; Katalin Solymosi; Ádám Solti
Journal:  J Exp Bot       Date:  2022-03-15       Impact factor: 7.298

  3 in total

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