Literature DB >> 33491919

Targeted Genetic Changes in Candida albicans Using Transient CRISPR-Cas9 Expression.

Manning Y Huang1, Max C Cravener2, Aaron P Mitchell2.   

Abstract

Candida albicans is an opportunistic fungal pathogen responsible for significant disease and mortality. Absent complete mating and other convenient methods, dissection of its virulence factors relies on robust tools to delete, complement, and otherwise modify genes of interest in this diploid organism. Here we describe the design principles and use of CRISPR associated nuclease 9 (Cas9) and single-guide RNAs transiently expressed from PCR cassettes to modify genes of interest, generating homozygous mutants in a single transformation step.
© 2021 Wiley Periodicals LLC. Basic Protocol 1: PCR amplification of CRISPR components Basic Protocol 2: Transformation of Candida albicans Basic Protocol 3: Selecting and genotyping transformants Alternate Protocol 1: Deletion with recyclable markers by CRISPR induced marker excision (CRIME) Alternate Protocol 2: Knock-in and combining multiple cassettes with overlapping homology. © 2021 Wiley Periodicals LLC.

Entities:  

Keywords:  CRISPR-Cas9; Candida albicans; gene deletion; gene editing; transient CRISPR-Cas9 expression

Mesh:

Substances:

Year:  2021        PMID: 33491919      PMCID: PMC7842826          DOI: 10.1002/cpz1.19

Source DB:  PubMed          Journal:  Curr Protoc        ISSN: 2691-1299


  26 in total

1.  Precise gene disruption in Saccharomyces cerevisiae by double fusion polymerase chain reaction.

Authors:  D C Amberg; D Botstein; E M Beasley
Journal:  Yeast       Date:  1995-10       Impact factor: 3.239

2.  A Candida albicans CRISPR system permits genetic engineering of essential genes and gene families.

Authors:  Valmik K Vyas; M Inmaculada Barrasa; Gerald R Fink
Journal:  Sci Adv       Date:  2015       Impact factor: 14.136

3.  Marker Recycling in Candida albicans through CRISPR-Cas9-Induced Marker Excision.

Authors:  Manning Y Huang; Aaron P Mitchell
Journal:  mSphere       Date:  2017-03-15       Impact factor: 4.389

4.  The Candida Genome Database (CGD): incorporation of Assembly 22, systematic identifiers and visualization of high throughput sequencing data.

Authors:  Marek S Skrzypek; Jonathan Binkley; Gail Binkley; Stuart R Miyasato; Matt Simison; Gavin Sherlock
Journal:  Nucleic Acids Res       Date:  2016-10-13       Impact factor: 16.971

5.  A CRISPR-Cas9-based gene drive platform for genetic interaction analysis in Candida albicans.

Authors:  Rebecca S Shapiro; Alejandro Chavez; Caroline B M Porter; Meagan Hamblin; Christian S Kaas; James E DiCarlo; Guisheng Zeng; Xiaoli Xu; Alexey V Revtovich; Natalia V Kirienko; Yue Wang; George M Church; James J Collins
Journal:  Nat Microbiol       Date:  2017-10-23       Impact factor: 17.745

6.  Circuit diversification in a biofilm regulatory network.

Authors:  Manning Y Huang; Carol A Woolford; Gemma May; C Joel McManus; Aaron P Mitchell
Journal:  PLoS Pathog       Date:  2019-05-22       Impact factor: 6.823

Review 7.  Candida albicans pathogenicity mechanisms.

Authors:  François L Mayer; Duncan Wilson; Bernhard Hube
Journal:  Virulence       Date:  2013-01-09       Impact factor: 5.882

8.  Candida albicans Gene Deletion with a Transient CRISPR-Cas9 System.

Authors:  Kyunghun Min; Yuichi Ichikawa; Carol A Woolford; Aaron P Mitchell
Journal:  mSphere       Date:  2016-06-15       Impact factor: 4.389

9.  Systematic Complex Haploinsufficiency-Based Genetic Analysis of Candida albicans Transcription Factors: Tools and Applications to Virulence-Associated Phenotypes.

Authors:  Virginia E Glazier; Thomas Murante; Kristy Koselny; Daniel Murante; Marisol Esqueda; Gina A Wall; Melanie Wellington; Chiung-Yu Hung; Anuj Kumar; Damian J Krysan
Journal:  G3 (Bethesda)       Date:  2018-03-28       Impact factor: 3.154

10.  Rapid Gene Concatenation for Genetic Rescue of Multigene Mutants in Candida albicans.

Authors:  Manning Y Huang; Carol A Woolford; Aaron P Mitchell
Journal:  mSphere       Date:  2018-04-25       Impact factor: 4.389

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  1 in total

1.  Genetic Screening of Candida albicans Inactivation Mutants Identifies New Genes Involved in Macrophage-Fungal Cell Interactions.

Authors:  Pablo Godoy; Peter John Darlington; Malcolm Whiteway
Journal:  Front Microbiol       Date:  2022-04-05       Impact factor: 6.064

  1 in total

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