| Literature DB >> 33490989 |
Jonathan D Hibshman1, Amy K Webster1, L Ryan Baugh1,2.
Abstract
Standard laboratory culture of Caenorhabditis elegans utilizes solid growth media with a bacterial food source. However, this culture method limits control of food availability and worm population density, factors that impact many life-history traits. Here, we describe liquid-culture protocols for precisely modulating bacterial food availability and population density, facilitating reliable production of arrested L1 larvae, dauer larvae, dietarily restricted worms, or well-fed worms. Worms can be grown in small quantities for standard assays or in the millions for other applications. For complete details on the use and execution of these protocols, please refer to Hibshman et al. (2016), Webster et al. (2018), and Jordan et al. (2019).Entities:
Keywords: Cell biology; Genetics; Model organisms
Mesh:
Year: 2021 PMID: 33490989 PMCID: PMC7811050 DOI: 10.1016/j.xpro.2020.100276
Source DB: PubMed Journal: STAR Protoc ISSN: 2666-1667
Summary of bacterial and worm concentrations for different liquid culture applications
| Bacterial concentration | Worm concentration | Application |
|---|---|---|
| 50 mg/mL | 1–5/μL | Large-scale liquid culture |
| 1 mg/mL | 5/μL | Dauer formation |
| 0 mg/mL | 1/μL | Starvation, L1 arrest |
| 25 mg/mL | 1/100μL | |
| 3.1 mg/mL | 1/100μL | Dietary restriction |
"1×" bacterial concentration refers to 25 mg/mL (OD600 16).
Figure 1Representative images of C. elegans arrested as L1 larvae and dauer larvae resulting from liquid-culture growth in Applications I and III
(A) Starved L1 larvae.
(B) Dauer larvae. Scale bars, 50 μm.
Figure 2Representative images of C. elegans fed ad libitum or restricted diets in Application IV
(A) Adult worm after 96 h in ad libitum culture (25 mg/mL HB101).
(B) Adult worm after 96 h in dietary restriction (3.1 mg/mL HB101). Scale bars, 200 μm.
| REAGENT or RESOURCE | SOURCE | IDENTIFIER |
|---|---|---|
| HB101 | CGC | N/A |
| Sodium hypochlorite solution | Sigma-Aldrich | 239305-500 mL |
| NaCl | Fisher | S271-3 kg |
| K2HPO4·3H2O | Macron | 7088-04-500 g |
| KH2PO4 | Acros Organics | 205920025-2.5 kg |
| Disodium EDTA | Sigma | E5134-1 kg |
| FeSO4·7H2O | Sigma | F8633-250 g |
| MnCl2·4H2O | Sigma | M8054-100 g |
| ZnSO4·7H2O | Sigma | Z4750-100 g |
| CuSO4·5H2O | Sigma-Aldrich | 209198-100 g |
| Citric acid monohydrate | Sigma | C1909-500 g |
| Tri-potassium citrate monohydrate | Sigma-Aldrich | P1722-500 g |
| CaCl2 | Avantor | 1311-01-500 g |
| MgSO4 | Macron | 6070-12-500 g |
| Tryptone | BD | 211705-500 g |
| Yeast extract | Apex | 20-254-500 g |
| Glycerol | Sigma | G5516-1 L |
| KOH | Sigma-Aldrich | P1767-1 kg |
| Streptomycin | Sigma | S1567-25 g |
| Cholesterol | Sigma | C8667-25 g |
| N2 | CGC | N/A |
| 15 mL conical tubes | Corning | 430791 |
| 25 mL flasks | Pyrex | 4980-25 mL |
| 500 mL flasks | Pyrex | 5100 |
| 2,800 mL flasks | Pyrex | 4420 |
| 16 mm test tubes | Pyrex | 7082016XX |
| 250 mL plastic centrifuge bottles | Nalgene | 3141-0250 |
S-Basal
| Reagent | Amount |
|---|---|
| NaCl | 5.9 g |
| 1 M KH2PO4, pH 6.0 | 50 mL |
| ddH2O | to 1 L |
Trace metals solution
| Reagent | Amount |
|---|---|
| Disodium EDTA | 1.86 g |
| FeSO4·7H2O | 0.69 g |
| MnCl2·4H2O | 0.2 g |
| ZnSO4·7H2O | 0.29 g |
| CuSO4·5H2O | 0.025 g |
| ddH2O | to 1 L |
1 M potassium citrate pH 6.0
| Reagent | Amount |
|---|---|
| Citric acid monohydrate | 20 g |
| Tri-potassium citrate monohydrate | 293.5 g |
| ddH2O | to 1 L |
S-complete (or S-medium)
| Reagent | Amount |
|---|---|
| S-basal | 1 L |
| 1 M Potassium citrate pH 6.0 | 10 mL |
| Trace metals solution | 10 mL |
| 1 M CaCl2 | 3 mL |
| 1 M MgSO4 | 3 mL |
LB
| Reagent | Amount |
|---|---|
| Tryptone | 10 g |
| NaCl | 10 g |
| Yeast extract | 5 g |
| ddH2O | 950 mL |
TB
| Reagent | Amount |
|---|---|
| Tryptone (100 μM) | 20 g |
| Yeast extract (100 μM) | 24 g |
| Glycerol | 4 mL |
| ddH2O | to 900 mL |
| Phosphate buffer (0.17 M KH2PO4, 0.72 M K2HPO4) | 100 mL |
Bleach solution
| Reagent | Amount |
|---|---|
| Hypochlorite | 2 mL |
| 5 M KOH or NaOH | 1 mL |
| ddH2O | 7 mL |