Literature DB >> 33490587

Characterization and phylogenetic analysis of the complete mitochondrial genome of sun loach (Yasuhikotakia eos).

Xiaoge Yang1, Yuxi Lian1, Minmin Chen1, Xuequn Li2, Daoping Yu1.   

Abstract

The complete mitochondrial genome of the sun loach (Yasuhikotakia eos) was determined based on Illumina data in this study. The result showed that the closed double-stranded circular mitogenome was 16,738 bp in total length (GenBank accession number: MT800510) with 58.41% AT. The mitochondrial DNA consisted of 13 protein-coding genes (PGCs), 22 transfer RNA (tRNA) genes, 2 ribosomal (rRNA) genes, and 1 non-coding control region. Phylogenetic analysis suggested that Y. eos was most closely related to its congener Y. modesta. This work provides molecular information for further research on species identification and evolutionary relationships.
© 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Botiinae; Yasuhikotakia eos; mitochondrial genome; phylogeny

Year:  2021        PMID： 33490587      PMCID： PMC7801111          DOI： 10.1080/23802359.2020.1842263

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN： 2380-2359            Impact factor:   0.658


  4 in total

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Journal:  PLoS One       Date:  2010-09-07       Impact factor: 3.240

4.  metaSPAdes: a new versatile metagenomic assembler.

Authors:  Sergey Nurk; Dmitry Meleshko; Anton Korobeynikov; Pavel A Pevzner
Journal:  Genome Res       Date:  2017-03-15       Impact factor: 9.043
  4 in total
  2 in total

1.  The complete mitochondrial genome of the Jaguar Loach (Yasuhikotakia splendida).

Authors:  Thomas B Waltzek; Kuttichantran Subramaniam; Pedro H O Viadanna; Zachary S Randall; Lawrence M Page
Journal:  Mitochondrial DNA B Resour       Date:  2021-05-23       Impact factor: 0.658

2.  The complete mitochondrial genome of the freshwater fish Traccatichthys pulcher (Cypriniformes: Nemacheilidae) from China.

Authors:  Xiao Jiang Chen; Lin Song; Wen Zhao Liu
Journal:  Mitochondrial DNA B Resour       Date:  2022-07-29       Impact factor: 0.610
  2 in total

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