Literature DB >> 33490556

Complete mitochondrial genome of the vulnerable malabar pufferfish Carinotetraodon travancoricus (Tetraodontiformes, Tetraodontidae).

Bingjian Liu1,2,3, Kehua Zhu1,3, Yifan Liu1,3, Lihua Jiang1,3, Zhenming Lü1,3, Liqin Liu1,3, Weinan Zhang1,3, Zhu Liu1,3, Wen Duan1,3, Li Gong1,2.   

Abstract

Carinotetraodon travancoricus was classified as vulnerable on the IUCN Red List due to habitat loss and overharvesting for the aquarium trade. To gain its molecular information and thus contribute to help in conserving this vulnerable species, we determined the complete mitochondrial DNA of the C. travancoricus. The size of the molecule is 16,542 nucleotides, containing 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes, a putative control region, and 1 origin of replication on the light-strand. The overall base composition includes C(28.8%), A(28.5%), T(27.1%), and G(15.6%). Moreover, the 13 PCGs encode 3800 amino acids in total. The result of the phylogenetic tree supports C. octofasciatus has a closest relationship with Tetraodon nigroviridis.
© 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Carinotetraodon travancoricus; mitogenome; phylogenetic tree

Year:  2018        PMID: 33490556      PMCID: PMC7800267          DOI: 10.1080/23802359.2018.1511843

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN: 2380-2359            Impact factor:   0.658


  3 in total

1.  Mitogenomic exploration of higher teleostean phylogenies: a case study for moderate-scale evolutionary genomics with 38 newly determined complete mitochondrial DNA sequences.

Authors:  M Miya; A Kawaguchi; M Nishida
Journal:  Mol Biol Evol       Date:  2001-11       Impact factor: 16.240

2.  A new phylogeny of tetraodontiform fishes (Tetraodontiformes, Acanthomorpha) based on 22 loci.

Authors:  Francesco Santini; Laurie Sorenson; Michael E Alfaro
Journal:  Mol Phylogenet Evol       Date:  2013-05-31       Impact factor: 4.286

3.  Special structure of mitochondrial DNA control region and phylogenetic relationship among individuals of the black rockfish, Sebastes schlegelii.

Authors:  Hui Zhang; Yan Zhang; Xiumei Zhang; Na Song; Tianxiang Gao
Journal:  Mitochondrial DNA       Date:  2012-10-16
  3 in total

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