Literature DB >> 33490543

Characterization of the complete chloroplast genome of Caulerpa cupressoides (Bryopsidales, Chlorophyta).

Hong Yan1,2, Yuan Yuan1,2, Qiang Qiu1,2, Dahai Gao3.   

Abstract

Caulerpa cupressoides (Vahl) C. Agardh is a widely distributed tropical green algae. The circular chloroplast genome was 130,895 bp in length, with a GC content of 34%. In total, 99 genes were identified and they were consisted of 63 coding genes, 30 tRNA genes, and 6 rRNA genes. This chloroplast genome did not show an obvious quadripartite structure. Phylogenetic analysis revealed that C. cupressoides, C. racemosa, and Tydemania expeditionis were close relatives, with high bootstrap values. The characterized complete chloroplast genome of C. cupressoides will provide essential date for further studies of Bryopsidales.
© 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Bryopsidales; Caulerpa cupressoides; chloroplast genome

Year:  2018        PMID: 33490543      PMCID: PMC7801000          DOI: 10.1080/23802359.2018.1501294

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN: 2380-2359            Impact factor:   0.658


  8 in total

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Journal:  Int Immunopharmacol       Date:  2010-06-27       Impact factor: 4.932

4.  The chloroplast genomes of Bryopsis plumosa and Tydemania expeditiones (Bryopsidales, Chlorophyta): compact genomes and genes of bacterial origin.

Authors:  Frederik Leliaert; Juan M Lopez-Bautista
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6.  The complete chloroplast and mitochondrial genomes of the green macroalga Ulva sp. UNA00071828 (Ulvophyceae, Chlorophyta).

Authors:  James T Melton; Frederik Leliaert; Ana Tronholm; Juan M Lopez-Bautista
Journal:  PLoS One       Date:  2015-04-07       Impact factor: 3.240

7.  GeSeq - versatile and accurate annotation of organelle genomes.

Authors:  Michael Tillich; Pascal Lehwark; Tommaso Pellizzer; Elena S Ulbricht-Jones; Axel Fischer; Ralph Bock; Stephan Greiner
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8.  NOVOPlasty: de novo assembly of organelle genomes from whole genome data.

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  8 in total

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